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A possible recognition mode of mRNA cap terminal structure by peptide: cooperative stacking and hydrogen-bond pairing interactions between m7GpppA and Trp-Leu-Glu.

作者信息

Ueda H, Doi M, Inoue M, Ishida T, Tanaka T, Uesugi S

机构信息

Osaka University of Pharmaceutical Sciences, Japan.

出版信息

Biochem Biophys Res Commun. 1988 Jul 15;154(1):199-204. doi: 10.1016/0006-291x(88)90670-5.

DOI:10.1016/0006-291x(88)90670-5
PMID:3395324
Abstract

1H-NMR and fluorescence spectroscopic studies on the interaction between the Trp-Leu-Glu and m7GpppA have shown a specific binding mode, in which the pi-pi stacking interaction of the Trp indole ring and the hydrogen-bond pairing of Glu carboxyl side group with 7-methylguanine base are simultaneously formed.

摘要

相似文献

1
A possible recognition mode of mRNA cap terminal structure by peptide: cooperative stacking and hydrogen-bond pairing interactions between m7GpppA and Trp-Leu-Glu.
Biochem Biophys Res Commun. 1988 Jul 15;154(1):199-204. doi: 10.1016/0006-291x(88)90670-5.
2
Cooperative stacking and hydrogen bond pairing interactions of fragment peptide in cap binding protein with mRNA cap structure.
Biochim Biophys Acta. 1991 Oct 10;1075(2):181-6. doi: 10.1016/0304-4165(91)90249-g.
3
1H-NMR studies on association of mRNA cap-analogues with tryptophan-containing peptides.
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4
Combination of Trp and Glu residues for recognition of mRNA cap structure. Analysis of m7G base recognition site of human cap binding protein (IF-4E) by site-directed mutagenesis.色氨酸（Trp）和谷氨酸（Glu）残基组合对mRNA帽结构的识别。通过定点诱变分析人帽结合蛋白（IF-4E）的m7G碱基识别位点。
FEBS Lett. 1991 Mar 25;280(2):207-10. doi: 10.1016/0014-5793(91)80294-d.
5
The stacking interactions in 7-methylguanine-tryptophan systems, a model study for the interaction between the 'cap' structure of mRNA and its binding protein.7-甲基鸟嘌呤-色氨酸体系中的堆积相互作用，一项关于mRNA“帽”结构与其结合蛋白之间相互作用的模型研究。
Biochem Biophys Res Commun. 1983 Sep 30;115(3):849-54. doi: 10.1016/s0006-291x(83)80012-6.
6
Recognition of a nucleic acid base by tryptophan-containing peptides: spectroscopic comparison of the interaction of Trp-Gly-Gly-Glu and Trp-Gly-Gly-Gln with 7-methylguanine base.
Chem Pharm Bull (Tokyo). 1994 Mar;42(3):674-6. doi: 10.1248/cpb.42.674.
7
A selective recognition mode of a nucleic acid base by an aromatic amino acid: L-phenylalanine-7-methylguanosine 5'-monophosphate stacking interaction.芳香族氨基酸对核酸碱基的选择性识别模式：L-苯丙氨酸与7-甲基鸟苷5'-单磷酸的堆积相互作用。
Nucleic Acids Res. 1988 Jul 11;16(13):6175-90. doi: 10.1093/nar/16.13.6175.
8
Indole ring binds to 7-methylguanine base by pi-pi stacking interaction. Crystal structure of 7-methylguanosine 5'-monophosphate-tryptamine complex.吲哚环通过π-π堆积相互作用与7-甲基鸟嘌呤碱基结合。7-甲基鸟苷5'-单磷酸-色胺复合物的晶体结构。
FEBS Lett. 1986 Jan 20;195(1-2):57-60. doi: 10.1016/0014-5793(86)80129-6.
9
Mutual assistance of hydrogen-bond pairing and aromatic stacking interactions for molecular recognition: spectroscopic study on the interaction of guanine base with cytosine and tryptophan molecules.
Biochem Biophys Res Commun. 1992 Mar 16;183(2):577-83. doi: 10.1016/0006-291x(92)90521-l.
10
Recognition of nucleic acid base by tryptophan-containing peptides: spectroscopic study on interaction of N-acetylTrp-(Gly)m-Asp-(Gly)n-TrpNHCH3 (m = 0-2, n = 0-2) with guanine base.
Chem Pharm Bull (Tokyo). 1993 Feb;41(2):231-4. doi: 10.1248/cpb.41.231.

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1
Identification of the cap binding domain of human recombinant eukaryotic protein synthesis initiation factor 4E using a photoaffinity analogue.使用光亲和类似物鉴定人重组真核蛋白质合成起始因子4E的帽结合结构域。
Protein Sci. 1997 Jan;6(1):125-31. doi: 10.1002/pro.5560060114.