Institute of Structural and Molecular Biology, Birkbeck, University of London, London, UK.
J Biol Chem. 2021 Jan-Jun;296:100744. doi: 10.1016/j.jbc.2021.100744. Epub 2021 May 4.
This review contains a personal account of the role played by the PDB in the development of the field of molecular chaperones and protein homeostasis, from the viewpoint of someone who experienced the concurrent advances in the structural biology, electron microscopy, and chaperone fields. The emphasis is on some key structures, including those of Hsp70, GroEL, Hsp90, and small heat shock proteins, that were determined as the molecular chaperone concept and systems for protein quality control were emerging. These structures were pivotal in demonstrating how seemingly nonspecific chaperones could assist the specific folding pathways of a variety of substrates. Moreover, they have provided mechanistic insights into the ATPase machinery of complexes such as GroEL/GroES that promote unfolding and folding and the disaggregases that extract polypeptides from large aggregates and disassemble amyloid fibers. The PDB has provided a framework for the current success in curating, evaluating, and distributing structural biology data, through both the PDB and the EMDB.
这篇综述从一个同时经历结构生物学、电子显微镜学和伴侣蛋白领域进展的人的角度,讲述了 PDB 在分子伴侣和蛋白质动态平衡领域的发展中所扮演的角色。重点介绍了一些关键结构,包括 Hsp70、GroEL、Hsp90 和小热激蛋白,这些结构的确定是在分子伴侣概念和蛋白质质量控制体系出现的同时进行的。这些结构对于证明看似非特异性的伴侣蛋白如何能够辅助各种底物的特定折叠途径至关重要。此外,它们为 GroEL/GroES 等促进展开和折叠的复合物的 ATP 酶机制以及从大聚集体中提取多肽并分解淀粉样纤维的解聚酶提供了机制上的见解。PDB 通过 PDB 和 EMDB 为当前在保存、评估和分发结构生物学数据方面的成功提供了一个框架。