使用单细胞 RNA 测序对进食和禁食状态下的小鼠后脑进行调查。
A survey of the mouse hindbrain in the fed and fasted states using single-nucleus RNA sequencing.
机构信息
MRC Metabolic Diseases Unit, University of Cambridge Metabolic Research Laboratories, Institute of Metabolic Science, Addenbrooke's Hospital, Cambridge, UK.
MRC Metabolic Diseases Unit, University of Cambridge Metabolic Research Laboratories, Institute of Metabolic Science, Addenbrooke's Hospital, Cambridge, UK; Department of Pathology, University of Cambridge, Cambridge, CB2 1QP, UK.
出版信息
Mol Metab. 2021 Nov;53:101240. doi: 10.1016/j.molmet.2021.101240. Epub 2021 May 4.
OBJECTIVE
The area postrema (AP) and nucleus tractus solitarius (NTS) located in the hindbrain are key nuclei that sense and integrate peripheral nutritional signals and consequently regulate feeding behaviour. While single-cell transcriptomics have been used in mice to reveal the gene expression profile and heterogeneity of key hypothalamic populations, similar in-depth studies have not yet been performed in the hindbrain.
METHODS
Using single-nucleus RNA sequencing, we provide a detailed survey of 16,034 cells within the AP and NTS of mice in the fed and fasted states.
RESULTS
Of these, 8,910 were neurons that group into 30 clusters, with 4,289 from mice fed ad libitum and 4,621 from overnight fasted mice. A total of 7,124 nuclei were from non-neuronal cells, including oligodendrocytes, astrocytes, and microglia. Interestingly, we identified that the oligodendrocyte population was particularly transcriptionally sensitive to an overnight fast. The receptors GLP1R, GIPR, GFRAL, and CALCR, which bind GLP1, GIP, GDF15, and amylin, respectively, are all expressed in the hindbrain and are major targets for anti-obesity therapeutics. We characterise the transcriptomes of these four populations and show that their gene expression profiles are not dramatically altered by an overnight fast. Notably, we find that roughly half of cells that express GIPR are oligodendrocytes. Additionally, we profile POMC-expressing neurons within the hindbrain and demonstrate that 84% of POMC neurons express either PCSK1, PSCK2, or both, implying that melanocortin peptides are likely produced by these neurons.
CONCLUSION
We provide a detailed single-cell level characterisation of AP and NTS cells expressing receptors for key anti-obesity drugs that are either already approved for human use or in clinical trials. This resource will help delineate the mechanisms underlying the effectiveness of these compounds and also prove useful in the continued search for other novel therapeutic targets.
目的
位于后脑的最后区(AP)和孤束核(NTS)是感应和整合外周营养信号的关键核团,从而调节进食行为。虽然单细胞转录组学已被用于揭示关键下丘脑群体的基因表达谱和异质性,但类似的深入研究尚未在后脑中进行。
方法
我们使用单细胞 RNA 测序,对进食和禁食状态下小鼠的 AP 和 NTS 中的 16034 个细胞进行了详细调查。
结果
其中 8910 个是神经元,分为 30 个簇,4289 个来自自由进食的小鼠,4621 个来自过夜禁食的小鼠。共有 7124 个核来自非神经元细胞,包括少突胶质细胞、星形胶质细胞和小胶质细胞。有趣的是,我们发现,少突胶质细胞群体对 overnight fast 特别敏感。GLP1R、GIPR、GFRAL 和 CALCR 受体分别结合 GLP1、GIP、GDF15 和胰淀素,它们均在脑后部表达,是抗肥胖治疗的主要靶点。我们对这四个群体的转录组进行了表征,并表明它们的基因表达谱没有因 overnight fast 而显著改变。值得注意的是,我们发现约一半表达 GIPR 的细胞是少突胶质细胞。此外,我们对脑后部表达 POMC 的神经元进行了分析,并证明 84%的 POMC 神经元表达 PCSK1、PSCK2 或两者均有,这表明黑皮质素肽可能由这些神经元产生。
结论
我们提供了对表达抗肥胖药物受体的 AP 和 NTS 细胞的详细单细胞水平特征描述,这些药物要么已经被批准用于人类使用,要么正在临床试验中。这个资源将有助于阐明这些化合物有效性的机制,并且在继续寻找其他新的治疗靶点方面也将非常有用。