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利用DNA条形码技术对在中国有分布记录的物种进行分子鉴定。

Molecular identification of species with distribution records in China using DNA barcode technology.

作者信息

Kang Yong

机构信息

Hainan Provincial Key Laboratory of Resources Conservation and Development of Southern Medicine and Key Laboratory of State Administration of Traditional Chinese Medicine for Agarwood Sustainable Utilization, Hainan Branch of the Institute of Medicinal Plant Development, Chinese Academy of Medical Sciences and Peking Union Medical College, Haikou, China.

出版信息

Mitochondrial DNA B Resour. 2021 Apr 26;6(4):1525-1535. doi: 10.1080/23802359.2021.1914210.

Abstract

species is one of the main plant resources that produce agarwood, which containing black resin with important economic and medicinal values. There are about 15 species known to the genus around the world, but only two can be found in China, i.e. and . In this study, and that endemic respectively to Hainan and Yunnan were sampled, on the basis of the investigation and observation of their main morphological features in plantation. Five primers, i.e. ITS2, , , and , were eventually selected for DNA barcoding. The results showed that the seed surface of is smooth or sparsely pubescent, and the seed appendages were long. While the seed surface of is densely covered with yellow hairs and the seed appendages are short. The sequence fragment has significant intraspecific and interspecific genetic distances. However, the species identification success rate of ITS2+ combination was finally screened to be the highest, which was verified by the BBA method of TaxonDNA. The phylogenetic trees cluster analysis revealed that the classification of and is significant, and there is geographic isolation between the two species. Therefore, on the premise of accurate identification of plant morphological characters, ITS2+ combination can be used to accurately identify the species in China.

摘要

该物种是产生沉香的主要植物资源之一,其含有的黑色树脂具有重要的经济和药用价值。全世界已知该属约有15个物种,但中国仅能找到两种,即[具体物种1]和[具体物种2]。在本研究中,分别对海南和云南特有的[具体物种1]和[具体物种2]进行了采样,采样基于对其种植园主要形态特征的调查和观察。最终选择了5对引物,即ITS2、[引物2]、[引物3]、[引物4]和[引物5]用于DNA条形码分析。结果表明,[具体物种1]的种子表面光滑或疏生短柔毛,种子附属物长。而[具体物种2]的种子表面密被黄色毛,种子附属物短。[具体序列]片段具有显著的种内和种间遗传距离。然而,最终筛选出ITS2 +组合的物种鉴定成功率最高,这通过TaxonDNA的BBA方法得到了验证。系统发育树聚类分析表明,[具体物种1]和[具体物种2]的分类明显,且两个物种之间存在地理隔离。因此,在准确鉴定植物形态特征的前提下,ITS2 +组合可用于准确鉴定中国的[具体物种]。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/ddd1/8079081/3947f202081f/TMDN_A_1914210_F0001_C.jpg

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