Department of Chemistry, Brandeis University, Waltham, MA, 02453, USA.
Department of Chemistry and Biochemistry, University of Oregon, Eugene, OR, 97403, USA.
Sci Rep. 2021 May 10;11(1):9864. doi: 10.1038/s41598-021-89116-4.
The coloring of zebrafish skin is often used as a model system to study biological pattern formation. However, the small number and lack of movement of chromatophores defies traditional Turing-type pattern generating mechanisms. Recent models invoke discrete short-range competition and long-range promotion between different pigment cells as an alternative to a reaction-diffusion scheme. In this work, we propose a lattice-based "Survival model," which is inspired by recent experimental findings on the nature of long-range chromatophore interactions. The Survival model produces stationary patterns with diffuse stripes and undergoes a Turing instability. We also examine the effect that domain growth, ubiquitous in biological systems, has on the patterns in both the Survival model and an earlier "Promotion" model. In both cases, domain growth alone is capable of orienting Turing patterns above a threshold wavelength and can reorient the stripes in ablated cells, though the wavelength for which the patterns orient is much larger for the Survival model. While the Survival model is a simplified representation of the multifaceted interactions between pigment cells, it reveals complex organizational behavior and may help to guide future studies.
斑马鱼的皮肤颜色通常被用作研究生物模式形成的模型系统。然而,色素细胞数量少且缺乏运动,这使得传统的图灵型模式生成机制难以适用。最近的模型提出了一种基于离散短程竞争和长程促进的替代方案,用于不同色素细胞之间的相互作用。在这项工作中,我们提出了一种基于格点的“生存模型”,该模型受到最近关于长程色素细胞相互作用本质的实验发现的启发。生存模型产生具有扩散条纹的稳定图案,并经历图灵不稳定性。我们还研究了在生存模型和早期的“促进”模型中,广泛存在于生物系统中的域生长对图案的影响。在这两种情况下,域生长本身就能够在高于阈值波长的情况下对图灵模式进行定向,并能够重新定向被消融细胞中的条纹,尽管生存模型中定向图案的波长要大得多。虽然生存模型是对色素细胞之间多方面相互作用的简化表示,但它揭示了复杂的组织行为,并可能有助于指导未来的研究。