Department of Chemical and Biomolecular Engineering, University of Pennsylvania, Philadelphia, Pennsylvania 19104, United States.
J Phys Chem B. 2021 May 27;125(20):5434-5442. doi: 10.1021/acs.jpcb.1c02191. Epub 2021 May 12.
Conformational transitions of flexible molecules, especially those driven by hydrophobic effects, tend to be hindered by desolvation barriers. For such transitions, it is thus important to characterize and understand the interplay between solvation and conformation. Using specialized molecular simulations, here we perform such a characterization for a hydrophobic polymer solvated in water. We find that an external potential, which unfavorably perturbs the polymer hydration waters, can trigger a coil-to-globule or collapse transition, and that the relative stabilities of the collapsed and extended states can be quantified by the strength of the requisite potential. Our results also provide mechanistic insights into the collapse transition, highlighting that the bottleneck to polymer collapse is the formation of a sufficiently large cluster, and the collective dewetting of such a cluster. We also study the collapse of the hydrophobic polymer in octane, a nonpolar solvent, and interestingly, we find that the mechanistic details of the transition are qualitatively similar to that in water.
柔性分子的构象转变,尤其是那些由疏水效应驱动的构象转变,往往受到去溶剂化障碍的阻碍。因此,对于这种转变,重要的是要描述和理解溶剂化和构象之间的相互作用。在这里,我们使用专门的分子模拟,对疏水聚合物在水中的溶剂化进行了这样的描述。我们发现,一个外部势场,如果不利于聚合物水合水,就可以引发卷曲到球团或崩溃转变,并且崩溃和扩展状态的相对稳定性可以通过所需势场的强度来定量。我们的结果还为崩溃转变提供了机制上的见解,强调了聚合物崩溃的瓶颈是形成足够大的团簇,以及这种团簇的集体去湿。我们还研究了疏水聚合物在非极性溶剂辛烷中的崩溃,有趣的是,我们发现转变的机制细节在本质上与在水中的相似。