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真空紫外圆二色光谱和分子动力学模拟研究髓鞘碱性蛋白与磷脂膜结合的构象。

Conformation of myelin basic protein bound to phosphatidylinositol membrane characterized by vacuum-ultraviolet circular-dichroism spectroscopy and molecular-dynamics simulations.

机构信息

Department of Physical Science, Graduate School of Science, Hiroshima University, Hiroshima, Japan.

Hiroshima Synchrotron Radiation Center, Hiroshima University, Hiroshima, Japan.

出版信息

Proteins. 2021 Oct;89(10):1251-1261. doi: 10.1002/prot.26146. Epub 2021 Jun 4.

DOI:10.1002/prot.26146
PMID:33998060
Abstract

The 18.5-kDa isoform of myelin basic protein (MBP) interacts with the membrane surface of the myelin sheath to construct its compact multilamellar structure. This study characterized the conformation of MBP in the membrane by measuring the vacuum-ultraviolet circular-dichroism (VUVCD) spectra of MBP in the bilayer liposome comprising the following essential lipid constituents of the myelin sheath: phosphatidylinositol (PI), phosphatidylinositol-4-phosphate (PIP), and phosphatidylinositol-4,5-bisphosphate (PIP2). The spectra of MBP exhibited the characteristic peaks of the helix structure in the presence of PI liposome, and the intensity increased markedly in the presence of PIP and PIP2 liposomes to show an isodichroic point. This suggests that the amount of the membrane-bound conformation of MBP enhanced due to the increased number of negative net charges on the liposome surfaces. Secondary-structure analysis revealed that MBP in the membrane comprised approximately 40% helix contents and eight helix segments. Molecular-dynamics (MD) simulations of the eight segments were conducted for 250 ns in the presence of PI membrane, which predicted two amphiphilic and three nonamphiphilic helices as the membrane-interaction sites. Further analysis of the distances of the amino-acid residues in each segment from the phosphate group suggested that the nonamphiphilic helices interact with the membrane surface electrostatically, while the amphiphilic ones invade the inside of the membrane to produce electrostatic and hydrophobic interactions. These results show that MBP can interact with the PI membrane via amphiphilic and nonamphiphilic helices under the control of a delicate balance between electrostatic and hydrophobic interactions.

摘要

18.5kDa 型髓鞘碱性蛋白(MBP)与髓鞘的膜表面相互作用,构建其紧密的多层结构。本研究通过测量由髓鞘鞘磷脂的以下必需脂质成分组成的双层脂质体中的 MBP 的真空紫外圆二色性(VUVCD)光谱来表征 MBP 在膜中的构象:磷脂酰肌醇(PI)、磷脂酰肌醇-4-磷酸(PIP)和磷脂酰肌醇-4,5-二磷酸(PIP2)。在存在 PI 脂质体的情况下,MBP 的光谱显示出螺旋结构的特征峰,并且在存在 PIP 和 PIP2 脂质体的情况下强度显着增加,表现出等圆二色点。这表明由于脂质体表面上的负净电荷数量增加,膜结合构象的 MBP 量增加。二级结构分析表明,膜中的 MBP 包含约 40%的螺旋含量和 8 个螺旋片段。在 PI 膜存在的情况下,对 8 个片段进行了 250ns 的分子动力学(MD)模拟,预测了两个两亲性和三个非两亲性螺旋作为与膜相互作用的位点。对每个片段中氨基酸残基与磷酸基团的距离的进一步分析表明,非两亲性螺旋与膜表面静电相互作用,而两亲性螺旋侵入膜内以产生静电和疏水相互作用。这些结果表明,MBP 可以通过两亲性和非两亲性螺旋与 PI 膜相互作用,在静电和疏水相互作用之间的精细平衡的控制下。

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