• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验

一名身份不明的中国移民所携带的K1血清型高毒力菌株的快速全基因组测序

Rapid Whole Genome Sequencing of Serotype K1 Hypervirulent from an Undocumented Chinese Migrant.

作者信息

Macleod C K, Khokhar F A, Warne B, Wick R, Butcher R, Cassimon B, Hayden P, Holt K, Török M E

机构信息

Department of Clinical Research, London School of Hygiene & Tropical Medicine, London, UK.

Medway Maritime Hospital, Gillingham, Kent, UK.

出版信息

Case Rep Infect Dis. 2021 Apr 28;2021:6638780. doi: 10.1155/2021/6638780. eCollection 2021.

DOI:10.1155/2021/6638780
PMID:34007495
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC8100418/
Abstract

BACKGROUND

Hypervirulent causes severe disseminated infections, typically with hepatic and central nervous system involvement including endophthalmitis. . We report a fatal case of an undocumented Chinese migrant in her 60s who presented to the emergency department with abdominal pain, lethargy, and headache over the preceding two weeks. She had a new diagnosis of diabetes mellitus on admission. Computed tomography scan of the thorax, abdomen, and pelvis showed bilateral pneumonia with liver abscesses. The patient was treated with empirical broad-spectrum antibiotics before was isolated from cerebrospinal fluid and blood cultures. The isolate was further characterised as a ST23 (ST: sequence type), serotype K1 hypervirulent strain using Nanopore sequencing. Despite admission to the intensive care unit, the patient died within 48 hrs of admission.

CONCLUSIONS

This case demonstrates the need for increased awareness of hypervirulent , even in countries where it occurs infrequently. Novel, rapid, sequencing technologies can support diagnosis in unusual presentations.

摘要

背景

高毒力菌株可引发严重的播散性感染,通常累及肝脏和中枢神经系统,包括眼内炎。我们报告一例60多岁身份不明的中国移民的致命病例,她在过去两周内出现腹痛、嗜睡和头痛,并前往急诊科就诊。入院时她被新诊断为糖尿病。胸部、腹部和骨盆的计算机断层扫描显示双侧肺炎伴肝脓肿。在从脑脊液和血培养中分离出该菌株之前,患者接受了经验性广谱抗生素治疗。使用纳米孔测序进一步将分离株鉴定为ST23(ST:序列类型)、血清型K1高毒力菌株。尽管入住了重症监护病房,但患者在入院后48小时内死亡。

结论

该病例表明,即使在高毒力菌株罕见出现的国家,也需要提高对其的认识。新型快速测序技术可支持对不寻常表现的诊断。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/6a66/8100418/f81c9d86ba26/CRIID2021-6638780.001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/6a66/8100418/f81c9d86ba26/CRIID2021-6638780.001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/6a66/8100418/f81c9d86ba26/CRIID2021-6638780.001.jpg

相似文献

1
Rapid Whole Genome Sequencing of Serotype K1 Hypervirulent from an Undocumented Chinese Migrant.一名身份不明的中国移民所携带的K1血清型高毒力菌株的快速全基因组测序
Case Rep Infect Dis. 2021 Apr 28;2021:6638780. doi: 10.1155/2021/6638780. eCollection 2021.
2
Bilateral osteomyelitis and liver abscess caused by hypervirulent Klebsiella pneumoniae- a rare clinical manifestation (case report).产超广谱β-内酰胺酶肺炎克雷伯菌致双侧骨髓炎并肝脓肿一例(病例报告)
BMC Infect Dis. 2018 Aug 7;18(1):380. doi: 10.1186/s12879-018-3277-4.
3
Pyogenic liver abscess caused by an atypical hypervirulent K1-ST23 in Mexico.墨西哥由非典型高毒力K1-ST23引起的化脓性肝脓肿。
IDCases. 2024 May 12;36:e01987. doi: 10.1016/j.idcr.2024.e01987. eCollection 2024.
4
Molecular Characterization of the Convergent Carbapenem-Resistant and Hypervirulent Klebsiella pneumoniae Strain K1-ST23, Collected in Chile during the COVID-19 Pandemic.分子特征分析在 COVID-19 大流行期间于智利收集的具有趋同碳青霉烯耐药性和高毒力的肺炎克雷伯菌 K1-ST23 株。
Microbiol Spectr. 2023 Jun 15;11(3):e0054023. doi: 10.1128/spectrum.00540-23. Epub 2023 May 16.
5
Whole-Genome-Sequencing characterization of bloodstream infection-causing hypervirulent Klebsiella pneumoniae of capsular serotype K2 and ST374.全基因组测序分析导致血流感染的高毒力肺炎克雷伯菌 K2 荚膜血清型和 ST374 株的特征。
Virulence. 2018 Jan 1;9(1):510-521. doi: 10.1080/21505594.2017.1421894.
6
Endogenous endophthalmitis caused by a multidrug-resistant hypervirulent Klebsiella pneumoniae strain belonging to a novel single locus variant of ST23: first case report in China.由一株新型 ST23 单系变体的多药耐药、高毒力肺炎克雷伯菌引起的内源性眼内炎:中国首例报告。
BMC Infect Dis. 2018 Dec 17;18(1):669. doi: 10.1186/s12879-018-3543-5.
7
Disseminated Hypervirulent Klebsiella pneumoniae Infection Following Travel: A Case of Cavitating Pneumonia, Hepatic and Renal Abscesses, and Thrombosis.旅行后播散性高毒力肺炎克雷伯菌感染:1例有空洞形成的肺炎、肝脓肿、肾脓肿及血栓形成病例
Cureus. 2025 Apr 11;17(4):e82059. doi: 10.7759/cureus.82059. eCollection 2025 Apr.
8
Emergence of K1 ST23 and K2 ST65 hypervirulent as true pathogens with specific virulence genes in cryptogenic pyogenic liver abscesses Shiraz Iran.在伊朗设拉子的隐源性化脓性肝脓肿中,出现了携带特定毒力基因的 K1 ST23 和 K2 ST65 超毒力菌株,成为真正的病原体。
Front Cell Infect Microbiol. 2022 Aug 9;12:964290. doi: 10.3389/fcimb.2022.964290. eCollection 2022.
9
Molecular typing and virulence analysis of serotype K1 Klebsiella pneumoniae strains isolated from liver abscess patients and stool samples from noninfectious subjects in Hong Kong, Singapore, and Taiwan.对来自香港、新加坡和中国台湾地区肝脓肿患者和非感染性个体粪便样本中分离的 K1 血清型肺炎克雷伯菌进行分子分型和毒力分析。
J Clin Microbiol. 2011 Nov;49(11):3761-5. doi: 10.1128/JCM.00977-11. Epub 2011 Sep 7.
10
A case of NDM-carbapenemase-producing hypervirulent sequence type 23 from the UK.来自英国的一例产NDM-碳青霉烯酶的高毒力序列型23菌株。
JMM Case Rep. 2018 May 17;5(9):e005130. doi: 10.1099/jmmcr.0.005130. eCollection 2018 Sep.

引用本文的文献

1
Hypervirulent (hv): Overview, Epidemiology, and Laboratory Detection.高毒力(hv):概述、流行病学及实验室检测
Pathog Immun. 2025 Jan 24;10(1):80-119. doi: 10.20411/pai.v10i1.777. eCollection 2024.
2
Successful treatment of acute respiratory distress syndrome caused by hypervirulent with extracorporeal membrane oxygenation and continuous renal replacement therapy: A case report and literature review.采用体外膜肺氧合和持续肾脏替代疗法成功治疗高毒力引起的急性呼吸窘迫综合征:一例报告及文献综述。
Front Med (Lausanne). 2022 Aug 24;9:936927. doi: 10.3389/fmed.2022.936927. eCollection 2022.
3
Antimicrobial Susceptibility, Virulence, and Genomic Features of a Hypervirulent Serotype K2, ST65 Causing Meningitis in Italy.

本文引用的文献

1
Performance of neural network basecalling tools for Oxford Nanopore sequencing.基于神经网络的牛津纳米孔测序碱基调用工具的性能。
Genome Biol. 2019 Jun 24;20(1):129. doi: 10.1186/s13059-019-1727-y.
2
Antibiotic-resistant hypervirulent causing community- acquired liver abscess: an emerging disease.耐抗生素的高毒力菌株导致社区获得性肝脓肿:一种新兴疾病。
Oxf Med Case Reports. 2019 May 31;2019(5):omz032. doi: 10.1093/omcr/omz032. eCollection 2019 May.
3
Hypervirulent Klebsiella pneumoniae.高毒力肺炎克雷伯菌。
在意大利引起脑膜炎的高毒力K2血清型、ST65的抗菌药敏性、毒力及基因组特征
Antibiotics (Basel). 2022 Feb 17;11(2):261. doi: 10.3390/antibiotics11020261.
Clin Microbiol Rev. 2019 May 15;32(3). doi: 10.1128/CMR.00001-19. Print 2019 Jun 19.
4
Assembly of long, error-prone reads using repeat graphs.使用重复图组装长的、易错的读取。
Nat Biotechnol. 2019 May;37(5):540-546. doi: 10.1038/s41587-019-0072-8. Epub 2019 Apr 1.
5
Hypervirulent Klebsiella pneumoniae: a new public health threat.高毒力肺炎克雷伯菌:一种新的公共卫生威胁。
Expert Rev Anti Infect Ther. 2019 Feb;17(2):71-73. doi: 10.1080/14787210.2019.1555470. Epub 2018 Dec 5.
6
A case of NDM-carbapenemase-producing hypervirulent sequence type 23 from the UK.来自英国的一例产NDM-碳青霉烯酶的高毒力序列型23菌株。
JMM Case Rep. 2018 May 17;5(9):e005130. doi: 10.1099/jmmcr.0.005130. eCollection 2018 Sep.
7
Tracking key virulence loci encoding aerobactin and salmochelin siderophore synthesis in Klebsiella pneumoniae.追踪编码肺炎克雷伯菌中 aerobactin 和 salmochelin 合成的关键毒力基因座。
Genome Med. 2018 Oct 29;10(1):77. doi: 10.1186/s13073-018-0587-5.
8
Population genomics of hypervirulent Klebsiella pneumoniae clonal-group 23 reveals early emergence and rapid global dissemination.高毒力肺炎克雷伯菌 23 克隆群的群体基因组学研究揭示了其早期出现和快速的全球传播。
Nat Commun. 2018 Jul 13;9(1):2703. doi: 10.1038/s41467-018-05114-7.
9
Genetic diversity, mobilisation and spread of the yersiniabactin-encoding mobile element ICEKp in Klebsiella pneumoniae populations.肠杆菌科细菌中携带耶尔森菌素的可移动元件 ICEKp 的遗传多样性、动员和传播。
Microb Genom. 2018 Sep;4(9). doi: 10.1099/mgen.0.000196. Epub 2018 Jul 9.
10
More Than Meets the Eye: Klebsiella pneumoniae Invasive Liver Abscess Syndrome Presenting with Endophthalmitis.表象之外:肺炎克雷伯菌侵袭性肝脓肿综合征伴发眼内炎
J Emerg Med. 2017 Jun;52(6):e221-e223. doi: 10.1016/j.jemermed.2017.01.043. Epub 2017 Mar 9.