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建议以 Lingulodinium polyedra 为例进行沟鞭藻类的副型描述,并基于已校正的 rRNA 序列数据进行 Gonyaulacales 的分子系统发生学研究。

Recommendations for epitypification of dinophytes exemplified by Lingulodinium polyedra and molecular phylogenetics of the Gonyaulacales based on curated rRNA sequence data.

机构信息

Alfred-Wegener-Institute, Helmholtz Centre for Polar and Marine Research, Am Handelshafen 12, D - 27 570 Bremerhaven, Germany.

Alfred-Wegener-Institute, Helmholtz Centre for Polar and Marine Research, Sylt, Hafenstr. 43, D - 25 992 List/Sylt, Germany.

出版信息

Harmful Algae. 2021 Apr;104:101956. doi: 10.1016/j.hal.2020.101956. Epub 2021 Mar 4.

DOI:10.1016/j.hal.2020.101956
PMID:34023073
Abstract

Gonyaulacales include a considerable number of harmful algae and to understand their origin and rise, knowledge of the evolutionary relationships is necessary. Many scientific names of protists introduced prior to the availability of DNA analytics are ambiguous and impede communication about biological species and their traits in the microbial world. Strains of Lingulodinium polyedra were established from its type locality in the Kiel Fjord (Germany) to clarify its taxonomy. Moreover, the phylogeny of Gonyaulacales was inferred based on 329 rRNA sequence accessions compiled in a curated sequence data base, with as much as possible type material equivalents included. Gonyaulacales were monophyletic and segregated into seven lineages at high systematic level, of which †Lingulodiniaceae constituted the first branch of the Gonyaulacales. Their type species had a plate formula APC (Po, X, cp), 3', 3a, 6'' 6c, 6s, 6''', 2'''' and is taxonomically clarified by epitypification. Recommendations for this important taxonomic tool are provided, with a focus on microorganisms. Most gonyaulacalean taxa established at generic rank are monophyletic, with Alexandrium, Coolia and Gonyaulax as notable exceptions. From an evolutionary perspective, gonyaulacalean dinophytes with quinqueform hypotheca are monophyletic and derive from a paraphyletic group showing the sexiform configuration.

摘要

绿藻门包括相当数量的有害藻类,为了了解其起源和发展,有必要了解它们的进化关系。在 DNA 分析可用之前引入的原生动物的许多学名是模糊的,并阻碍了微生物世界中关于生物物种及其特征的交流。为了澄清其分类学,从基尔峡湾(德国)的模式产地建立了多边盘藻的菌株。此外,根据在经过精心整理的序列数据库中编译的 329 个 rRNA 序列条目,推断了绿藻门的系统发育,尽可能包含了类型材料的等价物。绿藻门是单系的,并在高系统水平上分为七个谱系,其中 †Lingulodiniaceae 构成绿藻门的第一个分支。它们的模式种具有 APC(Po、X、cp)、3'、3a、6''6c、6s、6'''、2''''的板公式,并通过副型化进行了分类学澄清。提供了有关这一重要分类工具的建议,重点是微生物。大多数以属级建立的绿藻门分类群是单系的,只有亚历山大藻、酷藻和冠瘤海扇藻是明显的例外。从进化的角度来看,具有五边形胞壳的绿藻门沟鞭藻类是单系的,源自显示性形态的并系群。

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