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侵袭性嗜铬细胞瘤和副神经节瘤的突变谱及与TCGA数据的比较

Mutation Profile of Aggressive Pheochromocytoma and Paraganglioma with Comparison of TCGA Data.

作者信息

Choi Yun Mi, Lim Jinyeong, Jeon Min Ji, Lee Yu-Mi, Sung Tae-Yon, Hong Eun-Gyoung, Lee Ji-Young, Jang Se Jin, Kim Won Gu, Song Dong Eun, Chun Sung-Min

机构信息

Department of Internal Medicine, Hallym University Dongtan Sacred Heart Hospital, Hallym University College of Medicine, Gyeonggi-Do 18450, Korea.

Asan Center for Cancer Genome Discovery, Asan Institute for Life Sciences, Seoul 05505, Korea.

出版信息

Cancers (Basel). 2021 May 14;13(10):2389. doi: 10.3390/cancers13102389.

Abstract

In pheochromocytoma and paraganglioma (PPGL), germline or somatic mutations in one of the known susceptibility genes are identified in up to 60% patients. However, the peculiar genetic events that drive the aggressive behavior including metastasis in PPGL are poorly understood. We performed targeted next-generation sequencing analysis to characterize the mutation profile in fifteen aggressive PPGL patients and compared accessible data of aggressive PPGLs from The Cancer Genome Atlas (TCGA) with findings of our cohort. A total of 115 germline and 34 somatic variants were identified with a median 0.58 per megabase tumor mutation burden in our cohort. The most frequent mutation was germline mutation (27%) and the second frequent mutations were somatic mutations for , , and (13%, respectively). Patients were subtyped into three categories based on the kind of mutated genes: pseudohypoxia ( = 5), kinase ( = 5), and unknown ( = 5) group. In copy number variation analysis, deletion of chromosome arm 1p harboring gene was the most frequently observed. In our cohort, mutation and pseudohypoxia subtype were significantly associated with poor overall survival. In conclusion, subtyping of mutation profile can be helpful in aggressive PPGL patients with heterogeneous prognosis to make relevant follow-up plan and achieve proper treatment.

摘要

在嗜铬细胞瘤和副神经节瘤(PPGL)中,高达60%的患者可检测到已知易感基因之一的种系或体细胞突变。然而,导致PPGL侵袭性行为(包括转移)的特殊遗传事件仍知之甚少。我们进行了靶向二代测序分析,以明确15例侵袭性PPGL患者的突变谱,并将来自癌症基因组图谱(TCGA)的侵袭性PPGL的可获取数据与我们队列的研究结果进行比较。在我们的队列中,共鉴定出115个种系变异和34个体细胞变异,肿瘤突变负荷中位数为每兆碱基0.58个。最常见的突变是种系突变(27%),其次是 、 和 的体细胞突变(分别为13%)。根据突变基因的类型,患者被分为三类:假性低氧( = 5)、激酶( = 5)和未知( = 5)组。在拷贝数变异分析中,观察到最频繁的是携带 基因的1号染色体短臂缺失。在我们的队列中, 突变和假性低氧亚型与总体生存率差显著相关。总之,突变谱分型有助于对预后异质性的侵袭性PPGL患者制定相关随访计划并实现恰当治疗。

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