• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验

氢键网络决定 Cph1 和 AnPixJ 光敏色素的早期光致异构化过程。

Hydrogen-Bond Network Determines the Early Photoisomerization Processes of Cph1 and AnPixJ Phytochromes.

机构信息

Key Laboratory of Theoretical and Computational Photochemistry Ministry of Education, College of Chemistry, Beijing Normal University, Beijing, 100875, China.

College of Chemistry and Material Science, Sichuan Normal University, Chengdu, 610068, China.

出版信息

Angew Chem Int Ed Engl. 2021 Aug 16;60(34):18688-18693. doi: 10.1002/anie.202104853. Epub 2021 Jul 16.

DOI:10.1002/anie.202104853
PMID:34097335
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC8456922/
Abstract

Phytochrome proteins are light receptors that play a pivotal role in regulating the life cycles of plants and microorganisms. Intriguingly, while cyanobacterial phytochrome Cph1 and cyanobacteriochrome AnPixJ use the same phycocyanobilin (PCB) chromophore to absorb light, their excited-state behavior is very different. We employ multiscale calculations to rationalize the different early photoisomerization mechanisms of PCB in Cph1 and AnPixJ. We found that their electronic S , T , and S potential minima exhibit distinct geometric and electronic structures due to different hydrogen bond networks with the protein environment. These specific interactions influence the S electronic structures along the photoisomerization paths, ultimately leading to internal conversion in Cph1 but intersystem crossing in AnPixJ. This explains why the excited-state relaxation in AnPixJ is much slower (ca. 100 ns) than in Cph1 (ca. 30 ps). Further, we predict that efficient internal conversion in AnPixJ can be achieved upon protonating the carboxylic group that interacts with PCB.

摘要

光敏色素蛋白是一类光受体,在调控植物和微生物的生命周期方面发挥着关键作用。有趣的是,虽然蓝藻光敏色素 Cph1 和蓝藻藻胆体 AnPixJ 使用相同的藻红胆素(PCB)发色团来吸收光,但它们的激发态行为却非常不同。我们采用多尺度计算方法来合理说明 Cph1 和 AnPixJ 中 PCB 不同的早期光异构化机制。我们发现,由于与蛋白质环境的氢键网络不同,它们的 S、T 和 S 势能极小值表现出明显不同的几何和电子结构。这些特定的相互作用影响着光异构化路径上的 S 电子结构,最终导致 Cph1 中的内转换和 AnPixJ 中的系间窜越。这解释了为什么 AnPixJ 中的激发态弛豫过程(约 100 ns)比 Cph1 中的(约 30 ps)慢得多。此外,我们预测,在与 PCB 相互作用的羧酸基团质子化后,AnPixJ 中的有效内转换可以实现。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f618/8456922/03d6bb5fc058/ANIE-60-18688-g002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f618/8456922/227e5a73a96d/ANIE-60-18688-g005.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f618/8456922/442b1ca33ab5/ANIE-60-18688-g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f618/8456922/3461c5c0b1ce/ANIE-60-18688-g004.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f618/8456922/4347a25d9eab/ANIE-60-18688-g003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f618/8456922/03d6bb5fc058/ANIE-60-18688-g002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f618/8456922/227e5a73a96d/ANIE-60-18688-g005.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f618/8456922/442b1ca33ab5/ANIE-60-18688-g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f618/8456922/3461c5c0b1ce/ANIE-60-18688-g004.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f618/8456922/4347a25d9eab/ANIE-60-18688-g003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f618/8456922/03d6bb5fc058/ANIE-60-18688-g002.jpg

相似文献

1
Hydrogen-Bond Network Determines the Early Photoisomerization Processes of Cph1 and AnPixJ Phytochromes.氢键网络决定 Cph1 和 AnPixJ 光敏色素的早期光致异构化过程。
Angew Chem Int Ed Engl. 2021 Aug 16;60(34):18688-18693. doi: 10.1002/anie.202104853. Epub 2021 Jul 16.
2
Color Tuning in Red/Green Cyanobacteriochrome AnPixJ: Photoisomerization at C15 Causes an Excited-State Destabilization.红/绿藻胆色素蛋白AnPixJ中的颜色调谐:C15处的光异构化导致激发态失稳
J Phys Chem B. 2015 Jul 30;119(30):9688-95. doi: 10.1021/acs.jpcb.5b04655. Epub 2015 Jul 9.
3
Chromophore structure of cyanobacterial phytochrome Cph1 in the Pr state: reconciling structural and spectroscopic data by QM/MM calculations.处于红光吸收(Pr)态的蓝藻光敏色素Cph1的发色团结构:通过量子力学/分子力学(QM/MM)计算协调结构和光谱数据
Biophys J. 2009 May 20;96(10):4153-63. doi: 10.1016/j.bpj.2009.02.029.
4
Ultrafast red light activation of Synechocystis phytochrome Cph1 triggers major structural change to form the Pfr signalling-competent state.超快红光激活集胞藻藻红蛋白 Cph1 引发主要结构变化,形成 Pfr 信号有活性状态。
PLoS One. 2012;7(12):e52418. doi: 10.1371/journal.pone.0052418. Epub 2012 Dec 26.
5
Fluorescence investigation of the recombinant cyanobacterial phytochrome (Cph1) and its C-terminally truncated monomeric species (Cph1Delta2): implication for holoprotein assembly, chromophore-apoprotein interaction and photochemistry.重组蓝藻光敏色素(Cph1)及其C端截短的单体形式(Cph1Delta2)的荧光研究:对全蛋白组装、发色团-脱辅基蛋白相互作用及光化学的意义
J Photochem Photobiol B. 2002 May;67(1):39-50. doi: 10.1016/s1011-1344(02)00282-8.
6
Photophysical diversity of two novel cyanobacteriochromes with phycocyanobilin chromophores: photochemistry and dark reversion kinetics.两种新型藻胆体色基藻蓝胆素的光物理多样性:光化学和暗反转动力学。
FEBS J. 2012 Jan;279(1):40-54. doi: 10.1111/j.1742-4658.2011.08397.x. Epub 2011 Nov 11.
7
Dimerization and inter-chromophore distance of Cph1 phytochrome from Synechocystis, as monitored by fluorescence homo and hetero energy transfer.通过荧光同型和异型能量转移监测的来自集胞藻的Cph1光敏色素的二聚化及发色团间距离
Biochemistry. 2003 May 20;42(19):5885-95. doi: 10.1021/bi026946y.
8
Ultrafast dynamics of phytochrome from the cyanobacterium synechocystis, reconstituted with phycocyanobilin and phycoerythrobilin.用藻蓝胆素和藻红胆素重建的来自集胞藻的光敏色素的超快动力学。
Biophys J. 2002 Feb;82(2):1004-16. doi: 10.1016/S0006-3495(02)75460-X.
9
Solution-state (15)N NMR spectroscopic study of alpha-C-phycocyanin: implications for the structure of the chromophore-binding pocket of the cyanobacterial phytochrome Cph1.α- C-藻蓝蛋白的溶液态(15)N核磁共振光谱研究:对蓝藻光敏色素Cph1发色团结合口袋结构的启示
Chembiochem. 2007 Dec 17;8(18):2249-55. doi: 10.1002/cbic.200700256.
10
Crystallization and preliminary X-ray studies of the chromophore-binding domain of cyanobacteriochrome AnPixJ from Anabaena sp. PCC 7120.来自鱼腥藻7120的蓝细菌视紫红质AnPixJ发色团结合结构域的结晶及初步X射线研究。
Acta Crystallogr Sect F Struct Biol Cryst Commun. 2009 Feb 1;65(Pt 2):159-62. doi: 10.1107/S1744309108044151. Epub 2009 Jan 31.

引用本文的文献

1
Rotameric Heterogeneity of Conserved Tryptophan Is Responsible for Reduced Photochemical Quantum Yield in Cyanobacteriochrome Slr1393g3.保守色氨酸的旋转异构体异质性导致蓝细菌视紫红质Slr1393g3光化学量子产率降低。
Chemphyschem. 2025 Jan 14;26(2):e202400453. doi: 10.1002/cphc.202400453. Epub 2024 Nov 12.
2
Protein control of photochemistry and transient intermediates in phytochromes.植物色素中光化学和瞬态中间产物的蛋白质控制。
Nat Commun. 2022 Nov 11;13(1):6838. doi: 10.1038/s41467-022-34640-8.

本文引用的文献

1
Histidine protonation controls structural heterogeneity in the cyanobacteriochrome AnPixJg2.组氨酸质子化控制了海洋蓝细菌光感受器 AnPixJg2 的结构异质性。
Phys Chem Chem Phys. 2021 Mar 28;23(12):7359-7367. doi: 10.1039/d0cp05314g. Epub 2021 Mar 23.
2
Elucidating Ultrafast Multiphasic Dynamics in the Photoisomerization of Cyanobacteriochrome.解析蓝藻菌视紫红质光致异构化中的超快多相动力学。
J Phys Chem Lett. 2020 Oct 15;11(20):8819-8824. doi: 10.1021/acs.jpclett.0c02467. Epub 2020 Oct 1.
3
Revealing the origin of multiphasic dynamic behaviors in cyanobacteriochrome.
揭示蓝细菌视紫红质中多相动态行为的起源。
Proc Natl Acad Sci U S A. 2020 Aug 18;117(33):19731-19736. doi: 10.1073/pnas.2001114117. Epub 2020 Aug 5.
4
The Origin of Ultrafast Multiphasic Dynamics in Photoisomerization of Bacteriophytochrome.光致变色菌视紫红质异构化中超快多相动力学的起源。
J Phys Chem Lett. 2020 Aug 6;11(15):5913-5919. doi: 10.1021/acs.jpclett.0c01394. Epub 2020 Jul 13.
5
The interplay between chromophore and protein determines the extended excited state dynamics in a single-domain phytochrome.发色团和蛋白质之间的相互作用决定了单结构域光光色素中扩展激发态的动力学。
Proc Natl Acad Sci U S A. 2020 Jul 14;117(28):16356-16362. doi: 10.1073/pnas.1921706117. Epub 2020 Jun 26.
6
Structural elements regulating the photochromicity in a cyanobacteriochrome.调控蓝藻菌视紫红质光致变色的结构元件。
Proc Natl Acad Sci U S A. 2020 Feb 4;117(5):2432-2440. doi: 10.1073/pnas.1910208117. Epub 2020 Jan 21.
7
Elucidating the Molecular Mechanism of Ultrafast Pfr-State Photoisomerization in Bathy Bacteriophytochrome PaBphP.解析深海细菌光敏色素PaBphP中超快Pfr态光异构化的分子机制。
J Phys Chem Lett. 2019 Oct 17;10(20):6197-6201. doi: 10.1021/acs.jpclett.9b02446. Epub 2019 Oct 2.
8
E to Z Photoisomerization of Phytochrome Cph1Δ Exceeds the Born-Oppenheimer Adiabatic Limit.植物光敏色素Cph1Δ的E到Z光异构化超过了玻恩-奥本海默绝热极限。
J Phys Chem Lett. 2019 Jul 5;10(13):3550-3556. doi: 10.1021/acs.jpclett.9b01137. Epub 2019 Jun 13.
9
Rational conversion of chromophore selectivity of cyanobacteriochromes to accept mammalian intrinsic biliverdin.理性转换藻胆体发色团选择性以接受哺乳动物内在胆绿素。
Proc Natl Acad Sci U S A. 2019 Apr 23;116(17):8301-8309. doi: 10.1073/pnas.1818836116. Epub 2019 Apr 4.
10
The Effective Conjugation Length Is Responsible for the Red/Green Spectral Tuning in the Cyanobacteriochrome Slr1393g3.有效共轭长度决定了蓝藻光色素Slr1393g3中的红/绿光谱调谐。
Angew Chem Int Ed Engl. 2019 Feb 11;58(7):1934-1938. doi: 10.1002/anie.201810266. Epub 2019 Jan 24.