阿拉巴马州人群水平遗传药理学可操作性评估。

Evaluation of population-level pharmacogenetic actionability in Alabama.

机构信息

Department of Neurology, School of Medicine, University of Alabama at Birmingham, Birmingham, Alabama, USA.

Department of Genetics, School of Medicine, University of Alabama at Birmingham, Birmingham, Alabama, USA.

出版信息

Clin Transl Sci. 2021 Nov;14(6):2327-2338. doi: 10.1111/cts.13097. Epub 2021 Jun 24.

Abstract

The evolution of evidence and availability of Clinical Pharmacogenetic Implementation Consortium (CPIC) guidelines have enabled assessment of pharmacogenetic (PGx) actionability and clinical implementation. However, population-level actionability is not well-characterized. We leveraged the Alabama Genomic Health Initiative (AGHI) to evaluate population-level PGx actionability. Participants (>18 years), representing all 67 Alabama counties, were genotyped using the Illumina Global Screening array. Using CPIC guidelines, actionability was evaluated using (1) genotype data and genetic ancestry, (2) prescribing data, and (3) combined genotype and medication data. Of 6,331 participants, 4230 had genotype data and 3386 had genotype and prescription data (76% women; 76% White/18% Black [self-reported]). Genetic ancestry was concordant with self-reported race. For CPIC level A genes, 98.6% had an actionable genotype (99.4% Blacks/African; 98.5% White/European). With the exception of DPYD and CYP2C19, the prevalence of actionable genotypes by gene differed significantly by race. Based on prescribing, actionability was highest for CYP2D6 (70.9%), G6PD (54.1%), CYP2C19 (53.5%), and CYP2C9 (47.5%). Among participants prescribed atenolol, carvedilol, or metoprolol, ~ 50% had an actionable ADRB1 genotype, associated with decreased therapeutic response, with higher actionability among Blacks compared to Whites (62.5% vs. 47.4%; p < 0.0001). Based on both genotype and prescribing frequencies, no significant differences in actionability were observed between men and women. This statewide effort highlights PGx population-level impact to help optimize pharmacotherapy. Almost all Alabamians harbor an actionable genotype, and a significant proportion are prescribed affected medications. Statewide efforts, such as AGHI, lay the foundation for translational research and evaluate "real-world" outcomes of PGx.

摘要

证据的演变和临床药物遗传学实施联盟 (CPIC) 指南的可用性使得评估药物遗传学 (PGx) 的可操作性和临床实施成为可能。然而,人群水平的可操作性还没有很好地描述。我们利用阿拉巴马基因组健康倡议 (AGHI) 来评估人群水平的 PGx 可操作性。参与者(> 18 岁),代表阿拉巴马州的所有 67 个县,使用 Illumina 全球筛查阵列进行基因分型。使用 CPIC 指南,通过(1)基因型数据和遗传背景,(2)处方数据,以及(3)基因型和药物数据组合来评估可操作性。在 6331 名参与者中,有 4230 名有基因型数据,有 3386 名有基因型和处方数据(76%女性;76%白种人/18%黑人[自我报告])。遗传背景与自我报告的种族一致。对于 CPIC 水平 A 基因,98.6%的基因型具有可操作性(99.4%的黑人/非洲裔;98.5%的白种人/欧洲裔)。除了 DPYD 和 CYP2C19 外,不同种族的基因可操作性基因型的患病率有显著差异。根据处方,CYP2D6(70.9%)、G6PD(54.1%)、CYP2C19(53.5%)和 CYP2C9(47.5%)的可操作性最高。在服用阿替洛尔、卡维地洛或美托洛尔的参与者中,约 50%的人 ADRB1 基因型具有可操作性,这与治疗反应降低有关,黑人的可操作性高于白人(62.5%比 47.4%;p<0.0001)。根据基因型和处方频率,男女之间的可操作性没有显著差异。这项全州性的努力突出了 PGx 对人群水平的影响,以帮助优化药物治疗。几乎所有的阿拉巴马人都携带有可操作性的基因型,而且有相当一部分人服用了受影响的药物。像 AGHI 这样的全州性努力为转化研究奠定了基础,并评估了 PGx 的“真实世界”结果。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/b7fa/8604228/95d0f7e3faf7/CTS-14-2327-g005.jpg

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