Nakamura Teruya, Okabe Kohtaro, Hirayama Shogo, Chirifu Mami, Ikemizu Shinji, Morioka Hiroshi, Nakabeppu Yusaku, Yamagata Yuriko
Graduate School of Pharmaceutical Sciences, Kumamoto University, 5-1 Oehonmachi, Chuo-ku, Kumamoto, 862-0973 Kumamoto, Japan.
Priority Organization for Innovation and Excellence, Kumamoto University, 5-1 Oehonmachi, Chuo-ku, Kumamoto, 862-0973 Kumamoto, Japan.
Nucleic Acids Res. 2021 Jul 9;49(12):7154-7163. doi: 10.1093/nar/gkab492.
Mammalian MutY homologue (MUTYH) is an adenine DNA glycosylase that excises adenine inserted opposite 8-oxoguanine (8-oxoG). The inherited variations in human MUTYH gene are known to cause MUTYH-associated polyposis (MAP), which is associated with colorectal cancer. MUTYH is involved in base excision repair (BER) with proliferating cell nuclear antigen (PCNA) in DNA replication, which is unique and critical for effective mutation-avoidance. It is also reported that MUTYH has a Zn-binding motif in a unique interdomain connector (IDC) region, which interacts with Rad9-Rad1-Hus1 complex (9-1-1) in DNA damage response, and with apurinic/apyrimidinic endonuclease 1 (APE1) in BER. However, the structural basis for the BER pathway by MUTYH and its interacting proteins is unclear. Here, we determined the crystal structures of complexes between mouse MUTYH and DNA, and between the C-terminal domain of mouse MUTYH and human PCNA. The structures elucidated the repair mechanism for the A:8-oxoG mispair including DNA replication-coupled repair process involving MUTYH and PCNA. The Zn-binding motif was revealed to comprise one histidine and three cysteine residues. The IDC, including the Zn-binding motif, is exposed on the MUTYH surface, suggesting its interaction modes with 9-1-1 and APE1, respectively. The structure of MUTYH explains how MAP mutations perturb MUTYH function.
哺乳动物MutY同源物(MUTYH)是一种腺嘌呤DNA糖基化酶,可切除与8-氧代鸟嘌呤(8-oxoG)相对插入的腺嘌呤。已知人类MUTYH基因的遗传变异会导致MUTYH相关息肉病(MAP),这与结直肠癌有关。MUTYH在DNA复制过程中与增殖细胞核抗原(PCNA)一起参与碱基切除修复(BER),这对于有效避免突变而言是独特且关键的。也有报道称,MUTYH在一个独特的结构域间连接区(IDC)有一个锌结合基序,该基序在DNA损伤反应中与Rad9-Rad1-Hus1复合物(9-1-1)相互作用,并在BER中与脱嘌呤/脱嘧啶内切核酸酶1(APE1)相互作用。然而,MUTYH及其相互作用蛋白在BER途径中的结构基础尚不清楚。在这里,我们确定了小鼠MUTYH与DNA之间以及小鼠MUTYH的C末端结构域与人类PCNA之间复合物的晶体结构。这些结构阐明了A:8-oxoG错配的修复机制,包括涉及MUTYH和PCNA的DNA复制偶联修复过程。锌结合基序被揭示由一个组氨酸和三个半胱氨酸残基组成。包括锌结合基序在内的IDC暴露在MUTYH表面,分别暗示了其与9-1-1和APE1的相互作用模式。MUTYH的结构解释了MAP突变如何扰乱MUTYH功能。