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植物气体扩散动力学测量用户手册:气动测量仪的构建、操作与数据分析

A User Manual to Measure Gas Diffusion Kinetics in Plants: Pneumatron Construction, Operation, and Data Analysis.

作者信息

Trabi Christophe L, Pereira Luciano, Guan Xinyi, Miranda Marcela T, Bittencourt Paulo R L, Oliveira Rafael S, Ribeiro Rafael V, Jansen Steven

机构信息

Institute of Systematic Botany and Ecology, Ulm University, Ulm, Germany.

Center R&D in Ecophysiology and Biophysics, Agronomic Institute (IAC), Campinas, Brazil.

出版信息

Front Plant Sci. 2021 Jun 7;12:633595. doi: 10.3389/fpls.2021.633595. eCollection 2021.

DOI:10.3389/fpls.2021.633595
PMID:34163496
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC8216216/
Abstract

The Pneumatron device measures gas diffusion kinetics in the xylem of plants. The device provides an easy, low-cost, and powerful tool for research on plant water relations and gas exchange. Here, we describe in detail how to construct and operate this device to estimate embolism resistance of angiosperm xylem, and how to analyse pneumatic data. Simple and more elaborated ways of constructing a Pneumatron are shown, either using wires, a breadboard, or a printed circuit board. The instrument is based on an open-source hardware and software system, which allows users to operate it in an automated or semi-automated way. A step-by-step manual and a troubleshooting section are provided. An excel spreadsheet and an R-script are also presented for fast and easy data analysis. This manual aims at helping users to avoid common mistakes, such as unstable measurements of the minimum and maximum amount of gas discharged from xylem tissue, which has major consequences for estimating embolism resistance. Major advantages of the Pneumatron device include its automated and accurate measurements of gas diffusion rates, including highly precise measurements of the gas volume in intact, embolised conduits. It is currently unclear if the method can also be applied to woody monocots, gymnosperm species that possess torus-margo pit membranes, or to herbaceous species.

摘要

气压计装置可测量植物木质部中的气体扩散动力学。该装置为植物水分关系和气体交换研究提供了一种简便、低成本且功能强大的工具。在此,我们详细描述如何构建和操作此装置以估计被子植物木质部的栓塞抗性,以及如何分析气压数据。展示了使用电线、面包板或印刷电路板构建气压计的简单和更精细的方法。该仪器基于开源硬件和软件系统,允许用户以自动化或半自动化方式操作它。提供了一份分步手册和一个故障排除部分。还给出了一个Excel电子表格和一个R脚本,以便快速轻松地进行数据分析。本手册旨在帮助用户避免常见错误,例如对从木质部组织排出的气体最小和最大量的不稳定测量,这对估计栓塞抗性有重大影响。气压计装置的主要优点包括其对气体扩散速率的自动和准确测量,包括对完整、栓塞导管中气体体积的高精度测量。目前尚不清楚该方法是否也可应用于具有纹孔膜的木质单子叶植物、裸子植物物种或草本植物物种。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/7775/8216216/13d3c7860e1b/fpls-12-633595-g006.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/7775/8216216/c4bf3da4b441/fpls-12-633595-g001.jpg
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https://cdn.ncbi.nlm.nih.gov/pmc/blobs/7775/8216216/b6679f93bfe9/fpls-12-633595-g005.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/7775/8216216/13d3c7860e1b/fpls-12-633595-g006.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/7775/8216216/c4bf3da4b441/fpls-12-633595-g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/7775/8216216/c505540b98d6/fpls-12-633595-g002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/7775/8216216/37088802ae55/fpls-12-633595-g003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/7775/8216216/d9019c37064e/fpls-12-633595-g004.jpg
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本文引用的文献

1
Assessing the agreement between the pneumatic and the flow-centrifuge method for estimating xylem safety in temperate diffuse-porous tree species.评估气动法和流动离心法在估计温带散孔材树种木质部安全性方面的一致性。
Plant Biol (Stuttg). 2023 Dec;25(7):1171-1185. doi: 10.1111/plb.13573. Epub 2023 Sep 13.
2
A unit pipe pneumatic model to simulate gas kinetics during measurements of embolism in excised angiosperm xylem.一种用于模拟被子植物离体木质部栓塞测量过程中气体动力学的单元管道气动模型。
Tree Physiol. 2023 Jan 5;43(1):88-101. doi: 10.1093/treephys/tpac105.
3
Pneumatic Method to Measure Plant Xylem Embolism.
测量植物木质部栓塞的气动方法。
Bio Protoc. 2018 Oct 20;8(20):e3059. doi: 10.21769/BioProtoc.3059.
4
Small understorey trees have greater capacity than canopy trees to adjust hydraulic traits following prolonged experimental drought in a tropical forest.在热带森林中,经过长期实验干旱后,下层小树比上层树木具有更强的调节水力特征的能力。
Tree Physiol. 2022 Mar 9;42(3):537-556. doi: 10.1093/treephys/tpab121.
5
No gas source, no problem: Proximity to pre-existing embolism and segmentation affect embolism spreading in angiosperm xylem by gas diffusion.无气源,不成问题:临近预先存在的栓塞和分段通过气体扩散影响被子植物木质部中的栓塞扩散。
Plant Cell Environ. 2021 May;44(5):1329-1345. doi: 10.1111/pce.14016. Epub 2021 Feb 18.
6
Positive pressure in xylem and its role in hydraulic function.木质部中的正压力及其在水力功能中的作用。
New Phytol. 2021 Apr;230(1):27-45. doi: 10.1111/nph.17085. Epub 2021 Jan 12.
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Solid mechanics of the torus-margo in conifer intertracheid bordered pits.针叶树管胞具缘纹孔中孔缘-孔腔的固体力学
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Quantifying vulnerability to embolism in tropical trees and lianas using five methods: can discrepancies be explained by xylem structural traits?使用五种方法量化热带树木和藤本植物对栓塞的脆弱性:木质部结构特征能否解释差异?
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New Phytol. 2020 Nov;228(3):884-897. doi: 10.1111/nph.16746. Epub 2020 Jul 26.