Solon Adam J, Mastrangelo Claire, Vimercati Lara, Sommers Pacifica, Darcy John L, Gendron Eli M S, Porazinska Dorota L, Schmidt S K
Department of Ecology and Evolutionary Biology, University of Colorado, Boulder, Boulder, CO, United States.
School of Public Health, University of California, Berkeley, Berkeley, CA, United States.
Front Microbiol. 2021 Jun 10;12:654135. doi: 10.3389/fmicb.2021.654135. eCollection 2021.
Cold, dry, and nutrient-poor, the McMurdo Dry Valleys of Antarctica are among the most extreme terrestrial environments on Earth. Numerous studies have described microbial communities of low elevation soils and streams below glaciers, while less is known about microbial communities in higher elevation soils above glaciers. We characterized microbial life in four landscape features (habitats) of a mountain in Taylor Valley. These habitats varied significantly in soil moisture and include moist soils of a (1) lateral glacial moraine, (2) gully that terminates at the moraine, and very dry soils on (3) a southeastern slope and (4) dry sites near the gully. Using rRNA gene PCR amplicon sequencing of Bacteria and Archaea (16S SSU) and eukaryotes (18S SSU), we found that all habitat types harbored significantly different bacterial and eukaryotic communities and that these differences were most apparent when comparing habitats that had macroscopically visible soil crusts (gully and moraine) to habitats with no visible crusts (near gully and slope). These differences were driven by a relative predominance of Actinobacteria and a sp. in non-crust habitats, and by phototrophic bacteria and eukaryotes (e.g., a moss) and predators (e.g., tardigrades) in habitats with biological soil crusts (gully and moraine). The gully and moraine also had significantly higher 16S and 18S ESV richness than the other two habitat types. We further found that many of the phototrophic bacteria and eukaryotes of the gully and moraine share high sequence identity with phototrophs from moist and wet areas elsewhere in the Dry Valleys and other cold desert ecosystems. These include a Moss ( sp.), several algae (e.g., a sp.) and cyanobacteria (e.g., and spp.). Overall, the results reported here broaden the diversity of habitat types that have been studied in the Dry Valleys of Antarctica and suggest future avenues of research to more definitively understand the biogeography and factors controlling microbial diversity in this unique ecosystem.
南极洲的麦克默多干谷寒冷、干燥且养分匮乏,是地球上最极端的陆地环境之一。众多研究描述了冰川下方低海拔土壤和溪流中的微生物群落,而对于冰川上方高海拔土壤中的微生物群落了解较少。我们对泰勒谷一座山中的四种地貌特征(栖息地)的微生物生命进行了特征描述。这些栖息地的土壤湿度差异显著,包括:(1)侧碛的湿润土壤、(2)终止于碛的沟壑、(3)东南坡的非常干燥的土壤以及(4)沟壑附近的干燥地点。通过对细菌和古菌(16S SSU)以及真核生物(18S SSU)的rRNA基因PCR扩增子测序,我们发现所有栖息地类型都拥有显著不同的细菌和真核生物群落,并且当将具有宏观可见土壤结皮的栖息地(沟壑和碛)与没有可见结皮的栖息地(沟壑附近和斜坡)进行比较时,这些差异最为明显。这些差异是由放线菌和一种未培养细菌在无结皮栖息地中的相对优势,以及光合细菌和真核生物(如苔藓)和捕食者(如水熊虫)在具有生物土壤结皮的栖息地(沟壑和碛)中的相对优势所驱动的。沟壑和碛的16S和18S ESV丰富度也显著高于其他两种栖息地类型。我们进一步发现,沟壑和碛中的许多光合细菌和真核生物与干谷其他湿润和潮湿地区以及其他寒冷沙漠生态系统中的光合生物具有高度的序列同一性。这些包括一种苔藓(Bryum sp.)、几种藻类(如Prasiola sp.)和蓝细菌(如Leptolyngbya和Phormidium spp.)。总体而言,本文报道的结果拓宽了在南极洲干谷中已研究的栖息地类型的多样性,并提出了未来的研究途径,以便更确切地了解这个独特生态系统中的生物地理学以及控制微生物多样性的因素。