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突尼斯中 的 特征分析及与全球病原体种群的比较。

Characterization of in Tunisia and Comparison with a Global Pathogen Population.

机构信息

University of Carthage, National Agronomic Institute of Tunisia, LR14AGR01 Laboratory of Genetic and Cereal Breeding, 1082 Tunis, Tunisia.

CRP Wheat Septoria Precision Phenotyping Platform, 1082 Tunis, Tunisia.

出版信息

Plant Dis. 2022 Feb;106(2):464-474. doi: 10.1094/PDIS-04-21-0763-RE. Epub 2022 Feb 6.

Abstract

causes tan spot, an important foliar disease of wheat. A collection of . isolates from Tunisia, located in one of the main secondary centers of diversification of durum wheat, was tested for phenotypic race classification based on virulence on a host differential set and for the presence of the necrotrophic effector (NE) genes , , and by PCR analysis. While races 2, 4, 5, 6, 7, and 8 were identified according to their virulence phenotypes, PCR testing indicated the presence of "atypical" isolates that induced necrosis on the wheat differential 'Glenlea,' but lacked the expected gene, suggesting the involvement of other NEs in the . /wheat interaction. Genetic diversity and the . population structure were explored further by examining 59 Tunisian isolates and 35 isolates from Algeria, Azerbaijan, Canada, Iran, and Syria using 24 simple sequence repeat markers. Average genetic diversity, overall gene flow, and percentage polymorphic loci were estimated as 0.58, 2.09, and 87%, respectively. Analysis of molecular variance showed that 81% of the genetic variance occurred within populations and 19% occurred between populations. Cluster analysis by the unweighted pair group method indicated that isolates grouped together and were distantly related to isolates. Based on Nei's analysis, the global collection clustered into two distinct groups according to their region of origin. The results suggest that geographic origin and the host specificity imposed by different NEs can lead to differentiation among . populations.

摘要

引起褐斑病,这是小麦的一种重要叶部病害。从突尼斯采集了一批. 分离株,突尼斯位于硬质小麦多样化的主要次级中心之一,对这些分离株进行了表型毒力分类测试,根据在宿主差异群体上的毒力表型进行测试,并通过 PCR 分析检测坏死效应物 (NE) 基因,, 和 的存在。虽然根据其毒性表型鉴定出了 2、4、5、6、7 和 8 个毒力,但 PCR 测试表明存在“非典型”分离株,这些分离株在小麦差异品种“Glenlea”上诱导坏死,但缺乏预期的 基因,表明在. /小麦互作中涉及其他 NEs。通过进一步研究 59 个突尼斯分离株和来自阿尔及利亚、阿塞拜疆、加拿大、伊朗和叙利亚的 35 个分离株,利用 24 个简单序列重复标记,探讨了遗传多样性和. 种群结构。平均遗传多样性、总体基因流和多态性位点百分比分别估计为 0.58、2.09 和 87%。基于分子方差分析,81%的遗传方差发生在种群内,19%发生在种群间。基于非加权对组方法的聚类分析表明, 分离株聚为一组,与 分离株的亲缘关系较远。根据 Nei 的分析,全球收集的 分离株根据其起源地聚类为两个不同的组。结果表明,地理起源和不同 NE 施加的宿主特异性可以导致. 种群的分化。

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