Tao Tingting, Li Jin, Hang Tingting, Duan Peixin
Department of Endocrinology, Changxing People's Hospital, Huzhou, Zhejiang, China.
Neuro Endocrinol Lett. 2021 May 4;42(2):63-69.
Although several studies have demonstrated that preexisting diabetes mellitus (DM) may increase the risk of lung cancer (LC), rare research of the certain pathophysiology was reported up to now.
Aiming to identify the differentially expressed genes (DEGs) between type 2 diabetes mellitus (T2DM) and LC, gene expression profiles GSE55650 and GSE136043 were downloaded in the Gene Expression Omnibus (GEO) database. We carried out biological function analysis to seek significantly enriched pathways and functions for DEGs. A protein-protein interaction (PPI) network was performed to explore hub genes for diabetes and LC during Metformin's treatment.
Finally, the study found that there were 756 genes overlapped between T2DM and LC samples. It contained 133 common genes up-regulated both in T2DM and LC (DEGs1), 275 independent genes down-regulated in LC (DEGs2), 246 common genes down-regulated in both (DEGs3), and 102 independent genes down-regulated in diabetes (DEGs4). Glycine, serine and threonine metabolism, arginine and proline metabolism, TGF-beta signaling pathway, and pathways in cancer were significantly enriched in DEGs2 and DEGs4. Four hub genes (C3, THBS1, CXCL1, and TTN) were identified after treatment of Metformin (P<0.05, T-test).
Our findings demonstrated that the above-mentioned hub genes might play functional roles in the treatment of metformin for patients with diabetes and LC.
尽管多项研究表明,既往存在的糖尿病(DM)可能会增加肺癌(LC)的发病风险,但迄今为止,关于其具体病理生理学的研究报道较少。
为了鉴定2型糖尿病(T2DM)和LC之间的差异表达基因(DEG),从基因表达综合数据库(GEO)中下载了基因表达谱GSE55650和GSE136043。我们进行了生物学功能分析,以寻找DEG显著富集的通路和功能。构建了蛋白质-蛋白质相互作用(PPI)网络,以探索二甲双胍治疗期间糖尿病和LC的关键基因。
最终,研究发现T2DM和LC样本之间有756个基因重叠。其中包括133个在T2DM和LC中均上调的共同基因(DEGs1)、275个在LC中下调的独立基因(DEGs2)、246个在两者中均下调的共同基因(DEGs3)以及102个在糖尿病中下调的独立基因(DEGs4)。甘氨酸、丝氨酸和苏氨酸代谢、精氨酸和脯氨酸代谢、TGF-β信号通路以及癌症相关通路在DEGs2和DEGs4中显著富集。二甲双胍治疗后鉴定出4个关键基因(C3、THBS1、CXCL1和TTN)(P<0.05,t检验)。
我们的研究结果表明,上述关键基因可能在二甲双胍治疗糖尿病合并LC患者中发挥功能作用。