Centrum für Naturkunde, Leibniz-Institut zur Analyse des Biodiversitätswandels, Martin-Luther-King Platz 3, Hamburg, Germany.
Department of Zoology, Faculty of Science, Charles University, Viničná 7, Prague 2, Czech Republic.
Mol Phylogenet Evol. 2021 Oct;163:107241. doi: 10.1016/j.ympev.2021.107241. Epub 2021 Jul 2.
Dated species-level phylogenies are crucial for understanding the origin and evolutionary history of modern faunas, yet difficult to obtain due to the frequent absence of suitable age calibrations at species level. Substitution rates of related or more inclusive clades are often used to overcome this limitation but the accuracy of this approach remains untested. We compared tree dating based on substitution rates with analyses implementing fossil data by direct node-dating and indirect root-age constraints for the New Zealand endemic Berosus water beetles (Coleoptera: Hydrophilidae). The analysis based solely on substitution rates indicated a Miocene colonization of New Zealand and Pleistocene origin of species. By contrast, all analyses that implemented fossil data resulted in significantly older age estimates, indicating an ancient early Cenozoic origin of the New Zealand clade, diversification of species during or after the Oligocene transgression and Miocene-Pliocene origin of within-species population structure. Rate-calibrated time trees were incongruent with recently published Coleoptera time trees, the fossil record of Berosus and the distribution of outgroup species. Strong variation of substitution rates among Coleoptera lineages, as well as among lineages within the family Hydrophilidae, was identified as the principal reason for low accuracy of rate-calibrated analyses, resulting in underestimated node ages in Berosus. We provide evidence that Oligocene to Pliocene events, rather than the Pleistocene Glacial cycles, played an essential role in the formation of the modern New Zealand insect fauna.
有确切日期的物种系统发育关系对于理解现代动物群的起源和进化历史至关重要,但由于在物种水平上经常缺乏合适的年代校准,因此很难获得。相关或更具包容性的进化枝的替代率通常用于克服这一限制,但这种方法的准确性仍未经检验。我们比较了基于替代率的树年代测定与直接节点测年和间接根年龄约束分析的化石数据,这些分析针对新西兰特有的 Berosus 水甲虫(鞘翅目:Hydrophilidae)。仅基于替代率的分析表明,新西兰在中新世被殖民,物种起源于更新世。相比之下,所有实施化石数据的分析都导致了明显更古老的年龄估计,表明新西兰分支具有古老的早新生代起源,物种在渐新世海侵和中新世-上新世期间或之后多样化,以及种内种群结构的中新世-上新世起源。速率校准的时间树与最近发表的鞘翅目时间树、Berosus 的化石记录以及外群物种的分布不一致。鞘翅目谱系以及 Hydrophilidae 科内谱系之间替代率的强烈变化被确定为速率校准分析准确性低的主要原因,导致 Berosus 中节点年龄被低估。我们提供的证据表明,渐新世到上新世的事件,而不是更新世的冰期循环,在形成现代新西兰昆虫群中发挥了重要作用。