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建立增强子-启动子相互作用之谜背后的模型。

Models behind the mystery of establishing enhancer-promoter interactions.

作者信息

Monfils Kathryn, Barakat Tahsin Stefan

机构信息

Department of Clinical Genetics, Erasmus MC University Medical Center, PO Box 2040, 3000 CA, Rotterdam, the Netherlands.

Department of Clinical Genetics, Erasmus MC University Medical Center, PO Box 2040, 3000 CA, Rotterdam, the Netherlands.

出版信息

Eur J Cell Biol. 2021 Jun-Aug;100(5-6):151170. doi: 10.1016/j.ejcb.2021.151170. Epub 2021 Jul 7.

DOI:10.1016/j.ejcb.2021.151170
PMID:34246183
Abstract

Enhancers and promoters are transcriptional regulatory elements whose facilitated interactions increase gene expression. Enhancer DNA sequences can be located far away from the promoter sequences that they regulate. Currently, the mechanism facilitating the establishment of enhancer-promoter interactions remains unclear. However, mutations causing errors in these interactions have been linked to cancer and disease, further conveying the need to understand the full mechanism. This review discusses multiple models that have been proposed to describe how enhancers go the distance to interact with promoters. Evidence supporting loop formation models is reviewed in addition to more complex hypotheses involving aspects of 3D chromatin organization and phase separation.

摘要

增强子和启动子是转录调控元件,它们之间的相互作用促进基因表达。增强子DNA序列可位于远离其调控的启动子序列的位置。目前,促进增强子与启动子相互作用建立的机制尚不清楚。然而,这些相互作用中导致错误的突变已与癌症和疾病相关联,这进一步表明有必要了解完整的机制。本综述讨论了多种已被提出的模型,这些模型描述了增强子如何远距离与启动子相互作用。除了涉及三维染色质组织和相分离等方面的更复杂假设外,还综述了支持环形成模型的证据。

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1
Models behind the mystery of establishing enhancer-promoter interactions.建立增强子-启动子相互作用之谜背后的模型。
Eur J Cell Biol. 2021 Jun-Aug;100(5-6):151170. doi: 10.1016/j.ejcb.2021.151170. Epub 2021 Jul 7.
2
Enhancer selectivity in space and time: from enhancer-promoter interactions to promoter activation.增强子在时空上的选择性:从增强子-启动子相互作用到启动子激活。
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Boosting transcription by transcription: enhancer-associated transcripts.转录促进转录:增强子相关转录本。
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Characterization of genome-wide enhancer-promoter interactions reveals co-expression of interacting genes and modes of higher order chromatin organization.全基因组增强子-启动子相互作用的特征分析揭示了相互作用基因的共表达和更高阶染色质组织的模式。
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Chromatin insulators and long-distance interactions in Drosophila.果蝇中的染色质绝缘子和长距离相互作用。
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Estrogen-mediated induction of rat prolactin gene transcription requires the formation of a chromatin loop between the distal enhancer and proximal promoter regions.雌激素介导的大鼠催乳素基因转录诱导需要在远端增强子和近端启动子区域之间形成染色质环。
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Enhancer selectivity in space and time: from enhancer-promoter interactions to promoter activation.增强子在时空上的选择性:从增强子-启动子相互作用到启动子激活。
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H3K27me3-H3K4me1 transition at bivalent promoters instructs lineage specification in development.双价启动子处的H3K27me3-H3K4me1转换在发育过程中指导细胞谱系特化。
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