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通过绝对定量转录组测序分析确定的参与犬脂肪间充质干细胞向胰岛素分泌细胞转分化的新型功能基因。

Novel Functional Genes Involved in Transdifferentiation of Canine ADMSCs Into Insulin-Producing Cells, as Determined by Absolute Quantitative Transcriptome Sequencing Analysis.

作者信息

Dai Pengxiu, Li Jiakai, Chen Yijing, Zhang Luwen, Zhang Xinke, Wang Jinglu, Qi Guixiang, Zhang Yihua

机构信息

Shaanxi Branch of National Stem Cell Engineering and Technology Centre, College of Veterinary Medicine, Northwest A&F University, Yangling, China.

出版信息

Front Cell Dev Biol. 2021 Jun 28;9:685494. doi: 10.3389/fcell.2021.685494. eCollection 2021.

Abstract

The transdifferentiation of adipose-derived mesenchymal stem cells (ADMSCs) into insulin-producing cells (IPCs) is a potential resource for the treatment of diabetes. However, the changes of genes and metabolic pathways on the transdifferentiation of ADMSCs into IPCs are largely unknown. In this study, the transdifferentiation of canine ADMSCs into IPCs was completed using five types of procedures. Absolute Quantitative Transcriptome Sequencing Analysis was performed at different stages of the optimal procedure. A total of 60,151 transcripts were obtained. Differentially expressed genes (DEGs) were divided into five groups: IPC1 vs. ADSC (1169 upregulated genes and 1377 downregulated genes), IPC2 vs. IPC1 (1323 upregulated genes and 803 downregulated genes), IPC3 vs. IPC2 (722 upregulated genes and 680 downregulated genes), IPC4 vs. IPC3 (539 upregulated genes and 1561 downregulated genes), and Beta_cell vs. IPC4 (2816 upregulated genes and 4571 downregulated genes). The gene ontology (GO) and Kyoto Encyclopedia of Genes and Genomes (KEGG) enrichment analysis of DEGs revealed that many genes and signaling pathways that are essential for transdifferentiation. , , , , and were screened out, and the functions of five genes were verified further by overexpression and silence. , , and exhibited significant effects, can be used as specific key regulatory factors in the transdifferentiation of ADMSCs into IPCs. This study provides a foundation for future work to understand the mechanisms of the transdifferentiation of ADMSCs into IPCs and acquire IPCs with high maturity.

摘要

脂肪来源间充质干细胞(ADMSCs)向胰岛素产生细胞(IPCs)的转分化是治疗糖尿病的潜在资源。然而,ADMSCs向IPCs转分化过程中基因和代谢途径的变化在很大程度上尚不清楚。在本研究中,采用五种程序完成了犬ADMSCs向IPCs的转分化。在最佳程序的不同阶段进行了绝对定量转录组测序分析。共获得60151条转录本。差异表达基因(DEGs)分为五组:IPC1与ADSC(1169个上调基因和1377个下调基因)、IPC2与IPC1(1323个上调基因和803个下调基因)、IPC3与IPC2(722个上调基因和680个下调基因)、IPC4与IPC3(539个上调基因和1561个下调基因)以及β细胞与IPC4(2816个上调基因和4571个下调基因)。对DEGs的基因本体(GO)和京都基因与基因组百科全书(KEGG)富集分析表明,许多对转分化至关重要的基因和信号通路。筛选出了 、 、 、 和 ,并通过过表达和沉默进一步验证了五个基因的功能。 、 和 表现出显著作用,可作为ADMSCs向IPCs转分化的特异性关键调节因子。本研究为未来理解ADMSCs向IPCs转分化机制以及获得高成熟度IPCs的工作提供了基础。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/b620/8273515/7e421c110dcb/fcell-09-685494-g001.jpg

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