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双股螺吡咯烷桥联螺旋体中双卟啉空腔包埋芳香客体:热力学和动力学研究及包埋机理。

Encapsulation of Aromatic Guests in the Bisporphyrin Cavity of a Double-Stranded Spiroborate Helicate: Thermodynamic and Kinetic Studies and the Encapsulation Mechanism.

机构信息

Department of Molecular Design and Engineering, Graduate School of Engineering, Nagoya University, Nagoya 464-8603, Japan.

Department of Molecular and Macromolecular Chemistry, Graduate School of Engineering, Nagoya University, Nagoya 464-8603, Japan.

出版信息

J Org Chem. 2021 Aug 6;86(15):10501-10516. doi: 10.1021/acs.joc.1c01155. Epub 2021 Jul 20.

DOI:10.1021/acs.joc.1c01155
PMID:34282918
Abstract

A double-stranded spiroborate helicate bearing a bisporphyrin unit in the middle forms an inclusion complex with electron-deficient aromatic guests that are sandwiched between the porphyrins. In the present study, we systematically investigated the effects of size, electron density, and substituents of a series of aromatic guests on inclusion complex formations within the bisporphyrin. The thermodynamic and kinetic behaviors during the guest-encapsulation process were also investigated in detail. The guest-encapsulation abilities in the helicate increased with the increasing core sizes of the electron-deficient aromatic guests and decreased with the increasing bulkiness and number of substituents of the guests. Among the naphthalenediimide derivatives, those with bulky -substituents at both ends hardly formed an inclusion complex. Instead, they formed a [2]rotaxane-like inclusion complex through the water-mediated dynamic B-O bond cleavage/reformation of the spiroborate groups of the helicate, which enhanced the conformational flexibility of the helicate to enlarge the bisporphyrin cavity and form an inclusion complex. Based on the X-ray crystal structure of a unique pacman-like 1:1 inclusion complex between the helicate and an ammonium cation as well as the molecular dynamics simulation results, a plausible mechanism for the inclusion of a planar aromatic guest within the helicate is also proposed.

摘要

一种具有双卟啉单元的双链螺旋螯合物在中间形成一个包含复合物,其中包含电子缺芳烃客体,这些客体夹在卟啉之间。在本研究中,我们系统地研究了一系列芳烃客体的大小、电子密度和取代基对双卟啉内包含复合物形成的影响。还详细研究了客体包封过程中的热力学和动力学行为。在螯合物中,客体的包封能力随着电子缺芳烃客体的核心尺寸的增加而增加,随着客体的体积和取代基数量的增加而减小。在萘二酰亚胺衍生物中,那些在两端具有大取代基的几乎不能形成包含复合物。相反,它们通过螺旋螯合物的螺硼基团的水介导的动态 B-O 键断裂/重排形成[2]轮烷样包含复合物,从而增强了螯合物的构象灵活性,扩大了双卟啉腔并形成包含复合物。基于螺旋螯合物与铵阳离子之间独特的 pacman 样 1:1 包含复合物的 X 射线晶体结构和分子动力学模拟结果,还提出了一种在螺旋螯合物内包含平面芳烃客体的合理机制。

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Encapsulation of Aromatic Guests in the Bisporphyrin Cavity of a Double-Stranded Spiroborate Helicate: Thermodynamic and Kinetic Studies and the Encapsulation Mechanism.双股螺吡咯烷桥联螺旋体中双卟啉空腔包埋芳香客体:热力学和动力学研究及包埋机理。
J Org Chem. 2021 Aug 6;86(15):10501-10516. doi: 10.1021/acs.joc.1c01155. Epub 2021 Jul 20.
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