Suppr超能文献

光交联 O-糖基化蛋白与邻近生物分子。

Photocrosslinking O-GlcNAcylated Proteins to Neighboring Biomolecules.

机构信息

Department of Biochemistry, UT Southwestern Medical Center, Dallas, Texas.

出版信息

Curr Protoc. 2021 Jul;1(7):e201. doi: 10.1002/cpz1.201.

Abstract

This protocol enables identification of the interaction partners of O-GlcNAcylated proteins. The method involves the introduction of the diazirine photocrosslinker onto the O-GlcNAc modification within living cells. The photocrosslinker is activated by UV light to yield covalent crosslinking between O-GlcNAcylated proteins and neighboring molecules. The binding partners can be further characterized by immunoblot or proteomics mass spectrometry methods. The benefits of using the photocrosslinker include the capacity to trap low-affinity binding interactions and the ability to selectively target the interaction partners of the O-GlcNAcylated form of the protein of interest. © 2021 Wiley Periodicals LLC. Basic Protocol 1: In-cell production and crosslinking of O-GlcNDAzylated proteins Basic Protocol 2: Immunoblot analysis to assess O-GlcNDAz crosslinking Support Protocol: Detection of UDP-GlcNDAz from cell lysates.

摘要

本方案可用于鉴定 O-GlcNAc 修饰蛋白的相互作用伙伴。该方法涉及在活细胞内将叠氮化物光交联剂引入 O-GlcNAc 修饰中。光交联剂通过紫外光激活,在 O-GlcNAc 修饰蛋白与邻近分子之间产生共价交联。通过免疫印迹或蛋白质组学质谱方法可以进一步鉴定结合伙伴。使用光交联剂的好处包括能够捕获低亲和力的结合相互作用,以及能够选择性地针对感兴趣的蛋白的 O-GlcNAc 修饰形式的相互作用伙伴。© 2021 Wiley Periodicals LLC. 基本方案 1:细胞内 O-GlcNDAz 蛋白的产生和交联 基本方案 2:评估 O-GlcNDAz 交联的免疫印迹分析 支持方案:从细胞裂解物中检测 UDP-GlcNDAz。

相似文献

9
Synthesis of Cell-Permeable -Acetylhexosamine 1-Phosphates.细胞通透的 -乙酰己糖胺 1-磷酸酯的合成。
J Org Chem. 2021 Dec 17;86(24):18257-18264. doi: 10.1021/acs.joc.1c01781. Epub 2021 Oct 7.

引用本文的文献

1
Synthesis of Cell-Permeable -Acetylhexosamine 1-Phosphates.细胞通透的 -乙酰己糖胺 1-磷酸酯的合成。
J Org Chem. 2021 Dec 17;86(24):18257-18264. doi: 10.1021/acs.joc.1c01781. Epub 2021 Oct 7.

本文引用的文献

1
Glycoengineering: scratching the surface.糖基工程:略探其貌。
Biochem J. 2021 Feb 26;478(4):703-719. doi: 10.1042/BCJ20200612.
2
5
Photocrosslinking probes for capture of carbohydrate interactions.用于捕获碳水化合物相互作用的光交联探针。
Curr Opin Chem Biol. 2019 Dec;53:173-182. doi: 10.1016/j.cbpa.2019.09.002. Epub 2019 Nov 6.
6
O-GlcNAc as an Integrator of Signaling Pathways.O-连接的N-乙酰葡糖胺作为信号通路的整合因子。
Front Endocrinol (Lausanne). 2018 Oct 16;9:599. doi: 10.3389/fendo.2018.00599. eCollection 2018.
8
Asking more from metabolic oligosaccharide engineering.对代谢性寡糖工程提出更多要求。
Chem Sci. 2018 Sep 18;9(39):7585-7595. doi: 10.1039/c8sc02241k. eCollection 2018 Oct 21.
9
Structural basis of O-GlcNAc recognition by mammalian 14-3-3 proteins.哺乳动物 14-3-3 蛋白识别 O-GlcNAc 的结构基础。
Proc Natl Acad Sci U S A. 2018 Jun 5;115(23):5956-5961. doi: 10.1073/pnas.1722437115. Epub 2018 May 21.

文献AI研究员

20分钟写一篇综述,助力文献阅读效率提升50倍。

立即体验

用中文搜PubMed

大模型驱动的PubMed中文搜索引擎

马上搜索

文档翻译

学术文献翻译模型,支持多种主流文档格式。

立即体验