Suppr超能文献

不依赖氧气的荧光报告基因中黄素结合的表征

Characterization of flavin binding in oxygen-independent fluorescent reporters.

作者信息

Anderson Nolan T, Weyant Kevin B, Mukherjee Arnab

机构信息

Department of Chemical Engineering, University of California, Santa Barbara, California, 93106.

Smith School of Chemical & Biomolecular Engineering, Cornell University, Ithaca, New York, 14853.

出版信息

AIChE J. 2020 Dec;66(12). doi: 10.1002/aic.17083. Epub 2020 Oct 2.

Abstract

Fluorescent proteins based on light, oxygen, and voltage (LOV) sensing photoreceptors are among the few reporter gene technologies available for studying living systems in oxygen-free environments that render reporters based on the green fluorescent protein nonfluorescent. LOV reporters develop fluorescence by binding flavin mononucleotide (FMN), which they endogenously obtain from cells. As FMN is essential to cell physiology as well as for determining fluorescence in LOV proteins, it is important to be able to study and characterize flavin binding in LOV reporters. To this end, we report a method for reversibly separating FMN from two commonly used LOV reporters to prepare stable and soluble apoproteins. Using fluorescence titration, we measured the equilibrium dissociation constant for binding with all three cellular flavins: FMN, flavin adenine dinucleotide, and riboflavin. Finally, we exploit the riboflavin affinity of apo LOV reporters, identified in this work, to develop a fluorescence turn-on biosensor for vitamin B2.

摘要

基于光、氧和电压(LOV)传感光感受器的荧光蛋白是少数可用于在无氧环境中研究生命系统的报告基因技术之一,在这种环境中基于绿色荧光蛋白的报告基因会失去荧光。LOV报告基因通过结合黄素单核苷酸(FMN)产生荧光,它们从细胞内源性获取FMN。由于FMN对细胞生理以及确定LOV蛋白中的荧光至关重要,因此能够研究和表征LOV报告基因中的黄素结合非常重要。为此,我们报告了一种从两种常用的LOV报告基因中可逆分离FMN以制备稳定且可溶的脱辅基蛋白的方法。通过荧光滴定,我们测量了与所有三种细胞黄素(FMN、黄素腺嘌呤二核苷酸和核黄素)结合的平衡解离常数。最后,我们利用这项工作中鉴定出的脱辅基LOV报告基因对核黄素的亲和力,开发了一种用于维生素B2的荧光开启生物传感器。

相似文献

1
Characterization of flavin binding in oxygen-independent fluorescent reporters.
AIChE J. 2020 Dec;66(12). doi: 10.1002/aic.17083. Epub 2020 Oct 2.
3
Extreme dependence of Chloroflexus aggregans LOV domain thermo- and photostability on the bound flavin species.
Photochem Photobiol Sci. 2021 Dec;20(12):1645-1656. doi: 10.1007/s43630-021-00138-3. Epub 2021 Nov 18.
4
Chromophore exchange in the blue light-sensitive photoreceptor YtvA from Bacillus subtilis.
Chembiochem. 2011 Mar 7;12(4):641-6. doi: 10.1002/cbic.201000515. Epub 2011 Jan 21.
7
The recognition of glycolate oxidase apoprotein with flavin analogs in higher plants.
Acta Biochim Biophys Sin (Shanghai). 2004 Apr;36(4):290-6. doi: 10.1093/abbs/36.4.290.
8
Live-Cell Copper-Induced Fluorescence Quenching of the Flavin-Binding Fluorescent Protein CreiLOV.
Chembiochem. 2020 May 4;21(9):1356-1363. doi: 10.1002/cbic.201900669. Epub 2020 Jan 21.
9
Fluorescence correlation spectroscopy of flavins and flavoenzymes: photochemical and photophysical aspects.
Spectrochim Acta A Mol Biomol Spectrosc. 2001 Sep 14;57(11):2135-44. doi: 10.1016/s1386-1425(01)00494-2.
10
Structural tuning of the fluorescent protein iLOV for improved photostability.
J Biol Chem. 2012 Jun 22;287(26):22295-304. doi: 10.1074/jbc.M111.318881. Epub 2012 May 9.

引用本文的文献

1
Singlet oxygen-mediated photochemical cross-linking of an engineered fluorescent flavoprotein iLOV.
J Biol Chem. 2024 Nov;300(11):107845. doi: 10.1016/j.jbc.2024.107845. Epub 2024 Sep 30.
2
Rational Design of a Circularly Permuted Flavin-Based Fluorescent Protein.
Chembiochem. 2024 May 2;25(9):e202300814. doi: 10.1002/cbic.202300814. Epub 2024 Mar 28.
3
Molecular Imaging with Aquaporin-Based Reporter Genes: Quantitative Considerations from Monte Carlo Diffusion Simulations.
ACS Synth Biol. 2023 Oct 20;12(10):3041-3049. doi: 10.1021/acssynbio.3c00372. Epub 2023 Oct 4.
5
Enhanced small green fluorescent proteins as a multisensing platform for biosensor development.
Front Bioeng Biotechnol. 2022 Oct 17;10:1039317. doi: 10.3389/fbioe.2022.1039317. eCollection 2022.
6
Extreme dependence of Chloroflexus aggregans LOV domain thermo- and photostability on the bound flavin species.
Photochem Photobiol Sci. 2021 Dec;20(12):1645-1656. doi: 10.1007/s43630-021-00138-3. Epub 2021 Nov 18.
7
Computational Investigation of Structural and Spectroscopic Properties of LOV-Based Proteins with Improved Fluorescence.
J Phys Chem B. 2021 Feb 25;125(7):1768-1777. doi: 10.1021/acs.jpcb.0c10834. Epub 2021 Feb 10.

本文引用的文献

1
Imaging living obligate anaerobic bacteria with bilin-binding fluorescent proteins.
Curr Res Microb Sci. 2020 Sep;1:1-6. doi: 10.1016/j.crmicr.2020.04.001. Epub 2020 May 11.
2
Live-Cell Copper-Induced Fluorescence Quenching of the Flavin-Binding Fluorescent Protein CreiLOV.
Chembiochem. 2020 May 4;21(9):1356-1363. doi: 10.1002/cbic.201900669. Epub 2020 Jan 21.
3
Beyond the Green Fluorescent Protein: Biomolecular Reporters for Anaerobic and Deep-Tissue Imaging.
Bioconjug Chem. 2020 Feb 19;31(2):293-302. doi: 10.1021/acs.bioconjchem.9b00688. Epub 2019 Dec 23.
6
O-requiring molecular reporters of gene expression for anaerobic microorganisms.
Biosens Bioelectron. 2019 Jan 1;123:1-6. doi: 10.1016/j.bios.2018.09.066. Epub 2018 Sep 20.
7
Flavin Storage and Sequestration by Mycobacterium tuberculosis Dodecin.
ACS Infect Dis. 2018 Jul 13;4(7):1082-1092. doi: 10.1021/acsinfecdis.7b00237. Epub 2018 Apr 9.
9
Fluorogen-based reporters for fluorescence imaging: a review.
Methods Appl Fluoresc. 2015 Nov 12;3(4):042007. doi: 10.1088/2050-6120/3/4/042007.
10
The fluorescent protein iLOV outperforms eGFP as a reporter gene in the microaerophilic protozoan Trichomonas vaginalis.
Mol Biochem Parasitol. 2017 Sep;216:1-4. doi: 10.1016/j.molbiopara.2017.06.003. Epub 2017 Jun 9.

文献AI研究员

20分钟写一篇综述,助力文献阅读效率提升50倍。

立即体验

用中文搜PubMed

大模型驱动的PubMed中文搜索引擎

马上搜索

文档翻译

学术文献翻译模型,支持多种主流文档格式。

立即体验