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从酸性应激伴侣蛋白HdeA中去除二硫键并不会完全消除其在低pH值下的结构或功能。

Removal of disulfide from acid stress chaperone HdeA does not wholly eliminate structure or function at low pH.

作者信息

Aguirre-Cardenas M Imex, Geddes-Buehre Dane H, Crowhurst Karin A

机构信息

Department of Chemistry and Biochemistry, California State University Northridge, 18111 Nordhoff St., Northridge, CA, 91330-8262, USA.

Present address: Department of Chemistry, University of California Riverside, 900 University Ave, Riverside, CA, 92521, USA.

出版信息

Biochem Biophys Rep. 2021 Jul 1;27:101064. doi: 10.1016/j.bbrep.2021.101064. eCollection 2021 Sep.

DOI:10.1016/j.bbrep.2021.101064
PMID:34307907
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC8258783/
Abstract

HdeA is an acid-stress chaperone that operates in the periplasm of various strains of pathogenic gram-negative bacteria. Its primary function is to prevent irreversible aggregation of other periplasmic proteins when the bacteria enter the acidic environment of the stomach after contaminated food is ingested; its role is therefore to help the bacteria survive long enough to enter and colonize the intestines. The mechanism of operation of HdeA is unusual in that this helical homodimer is inactive when folded at neutral pH but becomes activated at low pH after the dimer dissociates and partially unfolds. Studies with chemical reducing agents previously suggested that the intramolecular disulfide bond is important for maintaining residual structure in HdeA at low pH and may be responsible for positioning exposed hydrophobic residues together for the purpose of binding unfolded client proteins. In order to explore its role in HdeA structure and chaperone function we performed a conservative cysteine to serine mutation of the disulfide. We found that, although residual structure is greatly diminished at pH 2 without the disulfide, it is not completely lost; conversely, the mutant is almost completely random coil at pH 6. Aggregation assays showed that mutated HdeA, although less successful as a chaperone than wild type, still maintains a surprising level of function. These studies highlight that we still have much to learn about the factors that stabilize residual structure at low pH and the role of disulfide bonds.

摘要

HdeA是一种酸性应激伴侣蛋白,在多种革兰氏阴性病原菌的周质中发挥作用。其主要功能是在细菌摄入受污染食物后进入胃部酸性环境时,防止其他周质蛋白发生不可逆聚集;因此,它的作用是帮助细菌存活足够长的时间以进入肠道并在其中定殖。HdeA的作用机制不同寻常,这种螺旋同型二聚体在中性pH值下折叠时无活性,但在低pH值下二聚体解离并部分展开后会被激活。先前使用化学还原剂进行的研究表明,分子内二硫键对于在低pH值下维持HdeA中的残余结构很重要,并且可能负责将暴露的疏水残基定位在一起,以便结合未折叠的客户蛋白。为了探究其在HdeA结构和伴侣功能中的作用,我们对二硫键进行了保守的半胱氨酸到丝氨酸突变。我们发现,虽然在没有二硫键的情况下,pH 2时残余结构大大减少,但并未完全丧失;相反,突变体在pH 6时几乎完全是无规卷曲。聚集分析表明,突变的HdeA虽然作为伴侣蛋白不如野生型成功,但仍保持着惊人的功能水平。这些研究突出表明,我们对于在低pH值下稳定残余结构的因素以及二硫键的作用仍有很多需要了解的地方。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/4cae/8258783/e6e4002f7a68/gr3.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/4cae/8258783/ad29467b362d/gr1.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/4cae/8258783/aed4c5d026f4/gr2.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/4cae/8258783/e6e4002f7a68/gr3.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/4cae/8258783/ad29467b362d/gr1.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/4cae/8258783/aed4c5d026f4/gr2.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/4cae/8258783/e6e4002f7a68/gr3.jpg

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本文引用的文献

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Biochim Biophys Acta Proteins Proteom. 2021 Feb;1869(2):140576. doi: 10.1016/j.bbapap.2020.140576. Epub 2020 Nov 27.
2
The complex role of the N-terminus and acidic residues of HdeA as pH-dependent switches in its chaperone function.HdeA 的 N 端和酸性残基在其伴侣功能中作为 pH 依赖性开关的复杂作用。
Biophys Chem. 2020 Sep;264:106406. doi: 10.1016/j.bpc.2020.106406. Epub 2020 May 19.
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Structural basis and mechanism of the unfolding-induced activation of HdeA, a bacterial acid response chaperone.
ArXiv. 2023 Jan 30:arXiv:2204.06159v2.
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Formation of Fibrils by the Periplasmic Molecular Chaperone HdeB from .HdeB 周质分子伴侣介导的纤维形成。
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细菌酸响应伴侣蛋白 HdeA 的展开诱导激活的结构基础和机制。
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Morbidity and mortality due to shigella and enterotoxigenic Escherichia coli diarrhoea: the Global Burden of Disease Study 1990-2016.志贺菌和肠产毒性大肠杆菌腹泻导致的发病和死亡:1990-2016 年全球疾病负担研究。
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Roles of structural plasticity in chaperone HdeA activity are revealed by F NMR.F核磁共振揭示了结构可塑性在伴侣蛋白HdeA活性中的作用。
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Characterizations of the Interactions between Escherichia coli Periplasmic Chaperone HdeA and Its Native Substrates during Acid Stress.酸性应激期间大肠杆菌周质伴侣蛋白HdeA与其天然底物之间相互作用的表征
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¹³C, ¹⁵N and ¹H backbone and side chain chemical shift assignment of acid-stress bacterial chaperone HdeA at pH 6.酸胁迫细菌伴侣蛋白HdeA在pH 6时的¹³C、¹⁵N和¹H主链及侧链化学位移归属
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