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BRD4 介导的延伸调控点为转录 RNA 聚合酶 II 进行 3'-加工和终止做好准备。

A BRD4-mediated elongation control point primes transcribing RNA polymerase II for 3'-processing and termination.

机构信息

Otto-Warburg-Laboratory, Max Planck Institute for Molecular Genetics, 14195 Berlin, Germany; Department of Biology, Chemistry, and Pharmacy, Freie Universität Berlin, 14195 Berlin, Germany.

Otto-Warburg-Laboratory, Max Planck Institute for Molecular Genetics, 14195 Berlin, Germany; Department of Mathematics and Computer Science, Freie Universität Berlin, 14195 Berlin, Germany.

出版信息

Mol Cell. 2021 Sep 2;81(17):3589-3603.e13. doi: 10.1016/j.molcel.2021.06.026. Epub 2021 Jul 28.


DOI:10.1016/j.molcel.2021.06.026
PMID:34324863
Abstract

Transcription elongation has emerged as a regulatory hub in gene expression of metazoans. A major control point occurs during early elongation before RNA polymerase II (Pol II) is released into productive elongation. Prior research has linked BRD4 with transcription elongation. Here, we use rapid BET protein and BRD4-selective degradation along with quantitative genome-wide approaches to investigate direct functions of BRD4 in Pol II transcription regulation. Notably, as an immediate consequence of acute BRD4 loss, promoter-proximal pause release is impaired, and transcriptionally engaged Pol II past this checkpoint undergoes readthrough transcription. An integrated proteome-wide analysis uncovers elongation and 3'-RNA processing factors as core BRD4 interactors. BRD4 ablation disrupts the recruitment of general 3'-RNA processing factors at the 5'-control region, which correlates with RNA cleavage and termination defects. These studies, performed in human cells, reveal a BRD4-mediated checkpoint and begin to establish a molecular link between 5'-elongation control and 3'-RNA processing.

摘要

转录延伸已成为后生动物基因表达的调控中心。在 RNA 聚合酶 II(Pol II)进入有效延伸之前,早期延伸过程中存在一个主要的控制点。先前的研究将 BRD4 与转录延伸联系起来。在这里,我们使用快速 BET 蛋白和 BRD4 选择性降解以及定量全基因组方法来研究 BRD4 在 Pol II 转录调控中的直接功能。值得注意的是,作为急性 BRD4 缺失的直接后果,启动子近端暂停释放受损,并且经过这个检查点的转录活跃的 Pol II 会经历通读转录。综合的全蛋白质组分析揭示了延伸和 3'-RNA 加工因子是 BRD4 的核心相互作用因子。BRD4 缺失破坏了一般 3'-RNA 加工因子在 5'-控制区的募集,这与 RNA 切割和终止缺陷相关。这些在人类细胞中进行的研究揭示了 BRD4 介导的检查点,并开始在 5'-延伸控制和 3'-RNA 加工之间建立分子联系。

相似文献

[1]
A BRD4-mediated elongation control point primes transcribing RNA polymerase II for 3'-processing and termination.

Mol Cell. 2021-9-2

[2]
BRD4: a general regulator of transcription elongation.

Transcription. 2022

[3]
The Histone Deacetylase SIRT6 Restrains Transcription Elongation via Promoter-Proximal Pausing.

Mol Cell. 2019-8-6

[4]
BRD4 assists elongation of both coding and enhancer RNAs by interacting with acetylated histones.

Nat Struct Mol Biol. 2014-11-10

[5]
Paf1C regulates RNA polymerase II progression by modulating elongation rate.

Proc Natl Acad Sci U S A. 2019-6-27

[6]
BRD4 coordinates recruitment of pause release factor P-TEFb and the pausing complex NELF/DSIF to regulate transcription elongation of interferon-stimulated genes.

Mol Cell Biol. 2013-4-15

[7]
BRD4 bimodal binding at promoters and drug-induced displacement at Pol II pause sites associates with I-BET sensitivity.

Epigenetics Chromatin. 2019-7-2

[8]
Bromodomain-containing protein 4 (BRD4) regulates RNA polymerase II serine 2 phosphorylation in human CD4+ T cells.

J Biol Chem. 2012-10-19

[9]
BET Bromodomain Proteins Function as Master Transcription Elongation Factors Independent of CDK9 Recruitment.

Mol Cell. 2017-7-6

[10]
Phosphorylation of histone H3 at Ser10 facilitates RNA polymerase II release from promoter-proximal pausing in Drosophila.

Genes Dev. 2007-11-1

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Genome-wide CRISPR screen for human factors involved in alternative polyadenylation based on differential localization of CD47.

Sci Rep. 2025-8-10

[2]
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Nat Commun. 2025-8-1

[3]
Integrative analysis of RNA binding proteins identifies DDX55 as a novel regulator of 3'UTR isoform diversity.

bioRxiv. 2025-5-8

[4]
Multi-omics and biochemical reconstitution reveal CDK7-dependent mechanisms controlling RNA polymerase II function at gene 5'- and 3' ends.

Cell Rep. 2025-7-22

[5]
BRD4 binds the nucleosome via both histone and DNA interactions.

bioRxiv. 2025-5-30

[6]
The extra-terminal domain drives the role of BET proteins in transcription.

bioRxiv. 2025-5-14

[7]
Catalytic-dependent and independent functions of the histone acetyltransferase CBP promote pioneer-factor-mediated zygotic genome activation.

Mol Cell. 2025-6-19

[8]
Studies on Gene Enhancer with KSHV mini-chromatin.

bioRxiv. 2025-3-24

[9]
ZmSSRP1 facilitates the progression of RNA polymerase II and is essential for kernel development in maize.

Plant Cell. 2025-4-2

[10]
Recurrent breakpoints in the BRD4 locus reduce toxicity associated with gene amplification.

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