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Profiling selective binding to promoter CpG islands by a single-DNA mechanical footprinting assay.

作者信息

Huang Wenmao, Yan Jie

机构信息

Department of Physics, National University of Singapore, Singapore, Singapore.

Department of Physics, National University of Singapore, Singapore, Singapore; Mechanobiology Institute, National University of Singapore, Singapore, Singapore; Centre for Bioimaging Sciences, National University of Singapore, Singapore, Singapore.

出版信息

Biophys J. 2021 Aug 17;120(16):3235-3236. doi: 10.1016/j.bpj.2021.07.010. Epub 2021 Jul 20.

Abstract
摘要

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3
Single-molecule manipulation quantification of site-specific DNA binding.
Curr Opin Chem Biol. 2019 Dec;53:106-117. doi: 10.1016/j.cbpa.2019.08.006. Epub 2019 Oct 31.
4
DNA Sequence Recognition of Human CXXC Domains and Their Structural Determinants.
Structure. 2018 Jan 2;26(1):85-95.e3. doi: 10.1016/j.str.2017.11.022. Epub 2017 Dec 21.
5
DNA residence time is a regulatory factor of transcription repression.
Nucleic Acids Res. 2017 Nov 2;45(19):11121-11130. doi: 10.1093/nar/gkx728.
6
Single molecule high-throughput footprinting of small and large DNA ligands.
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Methods. 2016 Aug 1;105:90-8. doi: 10.1016/j.ymeth.2016.03.025. Epub 2016 Mar 30.
8
Cancer genome landscapes.
Science. 2013 Mar 29;339(6127):1546-58. doi: 10.1126/science.1235122.
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A genome-wide analysis of CpG dinucleotides in the human genome distinguishes two distinct classes of promoters.
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