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新型亚氨基甲氧基衍生物的设计、合成、表征、抗菌活性、DNA 相互作用及分子对接研究。

New imino-methoxy derivatives: design, synthesis, characterization, antimicrobial activity, DNA interaction and molecular docking studies.

机构信息

Department of Chemistry, Faculty of Art and Sciences, Kahramanmaraş Sütçü İmam University, Kahramanmaraş, Turkey.

出版信息

J Biomol Struct Dyn. 2022;40(21):11082-11094. doi: 10.1080/07391102.2021.1955741. Epub 2021 Aug 6.

Abstract

Four new diarylmethylamine imine compounds (5a-5d) were prepared in order to examine their DNA binding properties, antimicrobial activity and molecular docking. The compounds were characterized by the common spectroscopic and analytic methods. Furthermore, solid-state structure of compounds 5a and 5c were determined by single-crystal X-ray diffraction studies. The compounds were then investigated for their DNA binding properties employing UV absorption, fluorescence spectroscopy under the physiological pH condition Tris-HCl buffer at pH 7.4. The compounds 5a-5d showed moderate binding constants with Kb values of 3.56 ± 0.3 × 10, 2.18 ± 0.2 × 10, 1.44 ± 0.3 × 10 and 2.56 ± 0.3 × 10 M, respectively. The molecular dockings were performed to investigate the ligand-DNA interactions. The in-silico DNA-compound interaction studies showed that the compounds interact with DNA in groove binding mode. Antimicrobial activity studies of imine compounds were tested against as bacteria, , and as fungi. While all compounds show moderate activity against bacteria, no activity against fungi has been investigated.Communicated by Ramaswamy H. Sarma.

摘要

为了研究它们的 DNA 结合特性、抗菌活性和分子对接,合成了四个新的二芳基甲基胺亚胺化合物(5a-5d)。这些化合物通过常见的光谱和分析方法进行了表征。此外,通过单晶 X 射线衍射研究确定了化合物 5a 和 5c 的固态结构。然后,在生理 pH 条件下的 Tris-HCl 缓冲液(pH 7.4)中,通过紫外吸收和荧光光谱研究了化合物对 DNA 的结合特性。化合物 5a-5d 与 DNA 的结合常数适中,Kb 值分别为 3.56 ± 0.3 × 10、2.18 ± 0.2 × 10、1.44 ± 0.3 × 10 和 2.56 ± 0.3 × 10 M。进行了分子对接以研究配体-DNA 相互作用。计算机辅助 DNA-化合物相互作用研究表明,这些化合物以沟结合模式与 DNA 相互作用。对亚胺化合物的抗菌活性进行了测试,以 作为细菌, 、 作为真菌。虽然所有化合物对细菌均表现出中等活性,但未对真菌活性进行研究。由 Ramaswamy H. Sarma 传达。

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