Yohe Laurel R, Fabbri Matteo, Hanson Michael, Bhullar Bhart-Anjan S
Department of Earth & Planetary Science, Peabody Museum of Natural History, Yale University, New Haven, CT, 06511, USA.
Curr Zool. 2020 Oct;66(5):505-514. doi: 10.1093/cz/zoaa051. Epub 2020 Sep 3.
Chemosensation is the most ubiquitous sense in animals, enacted by the products of complex gene families that detect environmental chemical cues and larger-scale sensory structures that process these cues. While there is a general conception that olfactory receptor () genes evolve rapidly, the universality of this phenomenon across vertebrates, and its magnitude, are unclear. The supposed correlation between molecular rates of chemosensory evolution and phenotypic diversity of chemosensory systems is largely untested. We combine comparative genomics and sensory morphology to test whether genes and olfactory phenotypic traits evolve at faster rates than other genes or traits. Using published genomes, we identified s in 21 tetrapods, including amphibians, reptiles, birds, and mammals and compared their rates of evolution to those of orthologous non- protein-coding genes. We found that, for all clades investigated, most genes evolve nearly an order of magnitude faster than other protein-coding genes, with many genes showing signatures of diversifying selection across nearly all taxa in this study. This rapid rate of evolution suggests that chemoreceptor genes are in "evolutionary overdrive," perhaps evolving in response to the ever-changing chemical space of the environment. To obtain complementary morphological data, we stained whole fixed specimens with iodine, µCT-scanned the specimens, and digitally segmented chemosensory and nonchemosensory brain regions. We then estimated phenotypic variation within traits and among tetrapods. While we found considerable variation in chemosensory structures, they were no more diverse than nonchemosensory regions. We suggest chemoreceptor genes evolve quickly in reflection of an ever-changing chemical space, whereas chemosensory phenotypes and processing regions are more conserved because they use a standardized or constrained architecture to receive and process a range of chemical cues.
化学感应是动物中最普遍存在的一种感觉，由检测环境化学信号的复杂基因家族产物以及处理这些信号的更大规模的感觉结构来实现。虽然人们普遍认为嗅觉受体（OR）基因进化迅速，但这种现象在脊椎动物中的普遍性及其程度尚不清楚。化学感应进化的分子速率与化学感应系统表型多样性之间的假定相关性在很大程度上未经检验。我们结合比较基因组学和感觉形态学来测试OR基因和嗅觉表型特征的进化速率是否比其他基因或特征更快。利用已发表的基因组，我们在21种四足动物中鉴定出了OR，包括两栖动物、爬行动物、鸟类和哺乳动物，并将它们的进化速率与直系同源非OR蛋白质编码基因的进化速率进行了比较。我们发现，对于所有研究的进化枝来说，大多数OR基因的进化速度比其他蛋白质编码基因快近一个数量级，在本研究中几乎所有分类群中，许多OR基因都显示出多样化选择的特征。这种快速的进化速率表明化学感受器基因处于“进化超速状态”，可能是为了应对不断变化的环境化学空间而进化。为了获得补充的形态学数据，我们用碘对整个固定标本进行染色，对标本进行μCT扫描，并对化学感应和非化学感应脑区进行数字分割。然后我们估计了性状内部和四足动物之间的表型变异。虽然我们发现化学感应结构存在相当大的变异，但它们并不比非化学感应区域更多样化。我们认为化学感受器基因快速进化以反映不断变化的化学空间，而化学感应表型和处理区域更保守，因为它们使用标准化或受限的结构来接收和处理一系列化学信号。
