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人类蛋白质 N-糖基化的数量遗传学。

Quantitative Genetics of Human Protein N-Glycosylation.

机构信息

Genos Glycoscience Research Laboratory, Zagreb, Croatia.

Institute of Cytology and Genetics SB RAS, Novosibirsk, Russia.

出版信息

Adv Exp Med Biol. 2021;1325:151-171. doi: 10.1007/978-3-030-70115-4_7.

Abstract

Although changes in protein glycosylation are observed in a wide range of diseases and pathological states, the examples of use of glycans as biomarkers and therapeutic targets are limited. This is not in small part because the understanding of human glycome regulation in vivo is incomplete and fragmented. Combination of human glycomics and genomics offers a powerful "data-driven hypotheses" approach to dissect the complex human glycobiology in vivo in an agnostic manner.In this chapter we review a decade of quantitative genetic studies of human N-glycome, including studies of its heritability and gene-mapping via genome-wide association studies (GWASs). We show that GWASs of human N-glycome start revealing regulators of the biochemical network of N-glycosylation. Some of these regulators demonstrate pleiotropic effects on human disease, especially autoimmune and inflammatory. We emphasize the use of in silico functional methods and multi-omics approaches to prioritize functional mechanisms to be further validated in laboratory experiments. This combined approach will lead to better understanding of mechanisms of regulation of human protein glycosylation and will provide a rich source of etiologic insight, therapeutic interventions, and biomarkers.

摘要

尽管在广泛的疾病和病理状态下都观察到蛋白质糖基化的变化,但糖作为生物标志物和治疗靶点的应用例子却很有限。造成这种情况的部分原因是,我们对体内人类糖组的调控机制还不完全了解。人类糖组学和基因组学的结合提供了一种强大的“数据驱动假说”方法,可以以一种不可知的方式解析体内复杂的人类糖生物学。在本章中,我们回顾了十年来对人类 N-糖组的定量遗传研究,包括通过全基因组关联研究 (GWAS) 研究其遗传率和基因定位的研究。我们表明,人类 N-糖组的 GWAS 开始揭示 N-糖基化生化网络的调控因子。其中一些调节剂对人类疾病表现出多效性作用,尤其是自身免疫性和炎症性疾病。我们强调使用计算功能方法和多组学方法来确定功能机制,以便在实验室实验中进一步验证。这种综合方法将有助于更好地理解人类蛋白质糖基化的调控机制,并为病因洞察、治疗干预和生物标志物提供丰富的来源。

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