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TDP-43 无规则区的芳香族和脂肪族残基可快速进行自组装。

Aromatic and aliphatic residues of the disordered region of TDP-43 are on a fast track for self-assembly.

机构信息

"Rocasolano" Institute for Physical Chemistry, Spanish National Research Council, Serrano 119, 28006, Madrid, Spain.

International Centre for Genetic Engineering and Biotechnology (ICGEB), Padriciano 99, I-34149, Trieste, Italy.

出版信息

Biochem Biophys Res Commun. 2021 Nov 12;578:110-114. doi: 10.1016/j.bbrc.2021.09.040. Epub 2021 Sep 20.

Abstract

The C-terminal, intrinsically disordered, prion-like domain (PrLD) of TDP-43 promotes liquid condensate and solid amyloid formation. These phase changes are crucial to the normal biological functions of the protein but also for its abnormal aggregation, which is implicated in amyotrophic lateral sclerosis (ALS) and certain dementias. We and other previously found that certain amyloid forms emerge from an intermediate condensed state that acts as a nucleus for fibrillization. To quantitatively ascertain the role of individual residues within TDP-43's PrLD in its early self-assembly we have followed the kinetics of NMR H-N HSQC signal loss to obtain values for the lag time, elongation rate and extent of condensate formation at equilibrium. The results of this analysis represent a robust corroboration that aliphatic and aromatic residues are key drivers of condensate formation.

摘要

TDP-43 的 C 端、内在无序的类朊病毒结构域 (PrLD) 促进了液体凝聚物和固体淀粉样纤维的形成。这些相变化对蛋白质的正常生物学功能至关重要,但也与其异常聚集有关,后者与肌萎缩性侧索硬化症 (ALS) 和某些痴呆症有关。我们和其他先前的研究发现,某些淀粉样纤维从中间凝聚态中出现,该凝聚态作为纤维形成的核。为了定量确定 TDP-43 的 PrLD 中单个残基在其早期自组装中的作用,我们跟踪了 NMR H-N HSQC 信号损失的动力学,以获得平衡时凝聚物形成的滞后时间、伸长率和程度的值。该分析的结果有力地证明了脂肪族和芳香族残基是凝聚物形成的关键驱动因素。

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