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一种海洋硅藻中新型氧化还原调节的类半胱天冬酶的生化特性

Biochemical Characterization of a Novel Redox-Regulated Metacaspase in a Marine Diatom.

作者信息

Graff van Creveld Shiri, Ben-Dor Shifra, Mizrachi Avia, Alcolombri Uria, Hopes Amanda, Mock Thomas, Rosenwasser Shilo, Vardi Assaf

机构信息

Department of Plant and Environmental Sciences, Weizmann Institute of Science, Rehovot, Israel.

School of Oceanography, University of Washington, Seattle, WA, United States.

出版信息

Front Microbiol. 2021 Sep 8;12:688199. doi: 10.3389/fmicb.2021.688199. eCollection 2021.

Abstract

Programmed cell death (PCD) in marine microalgae was suggested to be one of the mechanisms that facilitates bloom demise, yet its molecular components in phytoplankton are unknown. Phytoplankton are completely lacking any of the canonical components of PCD, such as caspases, but possess metacaspases. Metacaspases were shown to regulate PCD in plants and some protists, but their roles in algae and other organisms are still elusive. Here, we identified and biochemically characterized a type III metacaspase from the model diatom , termed PtMCA-IIIc. Through expression of recombinant PtMCA-IIIc in , we revealed that PtMCA-IIIc exhibits a calcium-dependent protease activity, including auto-processing and cleavage after arginine. Similar metacaspase activity was detected in cell extracts. PtMCA-IIIc overexpressing cells exhibited higher metacaspase activity, while CRISPR/Cas9-mediated knockout cells had decreased metacaspase activity compared to WT cells. Site-directed mutagenesis of cysteines that were predicted to form a disulfide bond decreased recombinant PtMCA-IIIc activity, suggesting its enhancement under oxidizing conditions. One of those cysteines was oxidized, detected in redox proteomics, specifically in response to lethal concentrations of hydrogen peroxide and a diatom derived aldehyde. Phylogenetic analysis revealed that this cysteine-pair is unique and widespread among diatom type III metacaspases. The characterization of a cell death associated protein in diatoms provides insights into the evolutionary origins of PCD and its ecological significance in algal bloom dynamics.

摘要

海洋微藻中的程序性细胞死亡(PCD)被认为是促进水华消亡的机制之一,但其在浮游植物中的分子成分尚不清楚。浮游植物完全缺乏PCD的任何典型成分,如半胱天冬酶,但拥有类半胱天冬酶。已证明类半胱天冬酶可调节植物和一些原生生物中的PCD,但其在藻类和其他生物中的作用仍不明确。在这里,我们从模式硅藻中鉴定并对一种III型类半胱天冬酶进行了生化表征,称为PtMCA-IIIc。通过在[具体宿主]中表达重组PtMCA-IIIc,我们发现PtMCA-IIIc表现出钙依赖性蛋白酶活性,包括自加工和精氨酸后切割。在[具体细胞]提取物中检测到类似的类半胱天冬酶活性。与野生型细胞相比,过表达PtMCA-IIIc的细胞表现出更高的类半胱天冬酶活性,而CRISPR/Cas9介导的敲除细胞的类半胱天冬酶活性降低。对预测形成二硫键的半胱氨酸进行定点诱变降低了重组PtMCA-IIIc的活性,表明其在氧化条件下活性增强。其中一个半胱氨酸被氧化,在氧化还原蛋白质组学中检测到,特别是在对致死浓度的过氧化氢和一种硅藻衍生的醛的反应中。系统发育分析表明,这种半胱氨酸对在硅藻III型类半胱天冬酶中是独特且广泛存在的。硅藻中一种与细胞死亡相关蛋白的表征为PCD的进化起源及其在藻华动态中的生态意义提供了见解。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/4318/8455989/8d67b27cdd5c/fmicb-12-688199-g001.jpg

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