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伴随着(菊科)进化的降倍性和基因组大小的双向变化。

Descending Dysploidy and Bidirectional Changes in Genome Size Accompanied (Asteraceae) Evolution.

机构信息

Faculty of Natural Sciences, Institute of Biology, Biotechnology and Environmental Protection, University of Silesia in Katowice, 40-007 Katowice, Poland.

Eötvös Loránd University Botanical Garden, Illés u. 25, 1083 Budapest, Hungary.

出版信息

Genes (Basel). 2021 Sep 17;12(9):1436. doi: 10.3390/genes12091436.

Abstract

The evolution of the karyotype and genome size was examined in species of sensu lato. The phylogenetic relationships, inferred from the plastid and nrITS DNA sequences, were used as a framework to infer the patterns of karyotype evolution. Five different base chromosome numbers ( = 3, 4, 5, 6, and 11) were observed. A phylogenetic analysis of the evolution of the chromosome numbers allowed the inference of = 6 as the ancestral state and the descending dysploidy as the major direction of the chromosome base number evolution. The derived base chromosome numbers ( = 5, 4, and 3) were found to have originated independently and recurrently in the different lineages of the genus. A few independent events of increases in karyotype asymmetry were inferred to have accompanied the karyotype evolution in . The genome sizes of 33 species differed seven-fold and the ancestral genome size was reconstructed to be 1C = 3.44 pg. Both decreases and increases in the genome size were inferred to have occurred within and between the lineages. The data suggest that, in addition to dysploidy, the amplification/elimination of various repetitive DNAs was likely involved in the genome and taxa differentiation in the genus.

摘要

我们研究了广义 物种的染色体组型和基因组大小的演变。我们根据质体和 nrITS DNA 序列推断出的系统发育关系,作为推断染色体组型进化模式的框架。观察到 5 种不同的基本染色体数目( = 3、4、5、6 和 11)。对染色体数目的进化进行系统发育分析,推断 = 6 为祖先状态,染色体基数的下降非整倍性是主要进化方向。衍生的基本染色体数目( = 5、4 和 3)在属的不同谱系中独立且反复地出现。推断在 的染色体组型进化过程中,还发生了一些增加染色体不对称性的独立事件。33 个物种的基因组大小差异了 7 倍,重建的祖先基因组大小为 1C = 3.44pg。在谱系内和谱系间都推断出基因组大小的减少和增加。这些数据表明,除了非整倍性之外,各种重复 DNA 的扩增/消除可能也参与了属内和属间的基因组和分类群分化。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/e75f/8472258/dc9d0149e9a9/genes-12-01436-g001.jpg

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