Biochemistry Research Laboratory (Rm216), Department of Life Sciences, Faculty of Science and Technology, The University of the West Indies, St. Augustine, Trinidad and Tobago.
Sci Rep. 2021 Sep 30;11(1):19466. doi: 10.1038/s41598-021-98979-6.
Mud volcanoes (MVs) are visible signs of oil and gas reserves present deep beneath land and sea. The Marac MV in Trinidad is the only MV associated with natural hydrocarbon seeps. Petrogenic polyaromatic hydrocarbons (PAHs) in its sediments must undergo biogeochemical cycles of detoxification as they can enter the water table and aquifers threatening ecosystems and biota. Recurrent hydrocarbon seep activity of MVs consolidates the growth of hydrocarbonoclastic fungal communities. Fungi possess advantageous metabolic and ecophysiological features for remediation but are underexplored compared to bacteria. Additionally, indigenous fungi are more efficient at PAH detoxification than commercial/foreign counterparts and remediation strategies remain site-specific. Few studies have focused on hydrocarbonoclastic fungal incidence and potential in MVs, an aspect that has not been explored in Trinidad. This study determined the unique biodiversity of culturable fungi from the Marac MV capable of metabolizing PAHs in vitro and investigated their extracellular peroxidase activity to utilize different substrates ergo their extracellular oxidoreductase activity (> 50% of the strains decolourized of methylene blue dye). Dothideomycetes and Eurotiomycetes (89% combined incidence) were predominantly isolated. ITS rDNA sequence cluster analysis confirmed strain identities. 18 indigenous hydrocarbonoclastic strains not previously reported in the literature and some of which were biosurfactant-producing, were identified. Intra-strain variability was apparent for PAH utilization, oil-tolerance and hydroxylase substrate specificity. Comparatively high levels of extracellular protein were detected for strains that demonstrated low substrate specificity. Halotolerant strains were also recovered which indicated marine-mixed substrata of the MV as a result of deep sea conduits. This work highlighted novel MV fungal strains as potential bioremediators and biocatalysts with a broad industrial applications.
泥火山(MV)是陆地和海洋深处存在石油和天然气储量的明显标志。特立尼达的马拉克 MV 是唯一与天然碳氢化合物渗漏有关的泥火山。其沉积物中的生源多环芳烃(PAHs)必须经历生物地球化学解毒循环,因为它们可能进入地下水位和含水层,从而威胁到生态系统和生物群。MV 中反复出现的碳氢化合物渗漏活动促进了烃降解真菌群落的生长。真菌具有有利于修复的代谢和生态生理特征,但与细菌相比,它们的研究还不够充分。此外,与商业/外国真菌相比,土著真菌在 PAH 解毒方面更有效,修复策略仍然是特定于地点的。很少有研究关注泥火山中烃降解真菌的发生率和潜力,而这在特立尼达尚未得到探索。本研究从马拉克 MV 中确定了能够在体外代谢 PAHs 的可培养真菌的独特生物多样性,并研究了它们的细胞外过氧化物酶活性,以利用不同的底物,从而利用它们的细胞外氧化还原酶活性(>50%的菌株使亚甲基蓝染料脱色)。被分离的真菌主要是子囊菌门和粪壳菌门(共 89%的发病率)。ITS rDNA 序列聚类分析证实了菌株的身份。鉴定出了 18 种以前未在文献中报道的本土烃降解菌株,其中一些是生物表面活性剂产生菌。在 PAH 利用、耐油性和羟化酶底物特异性方面,菌株的种内变异性明显。对于表现出低底物特异性的菌株,检测到细胞外蛋白质的含量较高。还回收了耐盐菌株,这表明 MV 是深海管道的海洋混合基质。这项工作突出了新型 MV 真菌菌株作为具有广泛工业应用的潜在生物修复剂和生物催化剂。