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用于细菌铜胺氧化酶的连续飞秒 X 射线晶体学的微晶制备。

Microcrystal preparation for serial femtosecond X-ray crystallography of bacterial copper amine oxidase.

机构信息

Department of Biochemistry, Faculty of Medicine, Osaka Medical and Pharmaceutical University, 2-7 Daigakumachi, Takatsuki, Osaka 569-8686, Japan.

Institute for Protein Research, Osaka University, 3-2 Yamadaoka, Suita, Osaka 565-0871, Japan.

出版信息

Acta Crystallogr F Struct Biol Commun. 2021 Oct 1;77(Pt 10):356-363. doi: 10.1107/S2053230X21008967. Epub 2021 Sep 21.

Abstract

Recent advances in serial femtosecond X-ray crystallography (SFX) using X-ray free-electron lasers have paved the way for determining radiation-damage-free protein structures under nonfreezing conditions. However, the large-scale preparation of high-quality microcrystals of uniform size is a prerequisite for SFX, and this has been a barrier to its widespread application. Here, a convenient method for preparing high-quality microcrystals of a bacterial quinoprotein enzyme, copper amine oxidase from Arthrobacter globiformis, is reported. The method consists of the mechanical crushing of large crystals (5-15 mm), seeding the crushed crystals into the enzyme solution and standing for 1 h at an ambient temperature of ∼26°C, leading to the rapid formation of microcrystals with a uniform size of 3-5 µm. The microcrystals diffracted X-rays to a resolution beyond 2.0 Å in SFX measurements at the SPring-8 Angstrom Compact Free Electron Laser facility. The damage-free structure determined at 2.2 Å resolution was essentially identical to that determined previously by cryogenic crystallography using synchrotron X-ray radiation.

摘要

近年来,利用 X 射线自由电子激光的连续飞秒 X 射线晶体学(SFX)取得了进展,为在非冻结条件下确定无辐射损伤的蛋白质结构铺平了道路。然而,在 SFX 中,高质量、大小均匀的微晶体的大规模制备是前提条件,这一直是其广泛应用的障碍。本文报道了一种方便的方法,用于制备球形节杆菌铜胺氧化酶这种细菌醌蛋白酶的高质量微晶体。该方法包括将大晶体(5-15mm)机械粉碎,将粉碎的晶体播种到酶溶液中,在环境温度约为 26°C 的条件下静置 1 小时,从而快速形成大小均匀的 3-5μm 的微晶体。在 SPring-8 Angstrom 紧凑型自由电子激光设施的 SFX 测量中,这些微晶体的 X 射线衍射分辨率超过 2.0Å。在 2.2Å 的分辨率下确定的无损伤结构与之前使用同步加速器 X 射线辐射通过低温晶体学确定的结构基本一致。

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本文引用的文献

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