School of Life Science, Liaoning University, Shenyang, 110036, P.R. China.
School of Environmental Engineering, Xuzhou University of Technology, Xuzhou, 221018, P.R. China.
Am J Bot. 2021 Dec;108(12):2371-2387. doi: 10.1002/ajb2.1771. Epub 2021 Dec 24.
The distribution of genetic diversity on the landscape has critical ecological and evolutionary implications. This may be especially the case on a local scale for foundation plant species because they create and define ecological communities, contributing disproportionately to ecosystem function.
We examined the distribution of genetic diversity and clones, which we defined first as unique multilocus genotypes (MLG), and then by grouping similar MLGs into multilocus lineages. We used 186 markers from inter-simple sequence repeats (ISSR) across 358 ramets from 13 patches of the foundation grass Leymus chinensis. We examined the relationship between genetic and clonal diversities, their variation with patch size, and the effect of the number of markers used to evaluate genetic diversity and structure in this species.
Every ramet had a unique MLG. Almost all patches consisted of individuals belonging to a single multilocus lineages. We confirmed this with a clustering algorithm to group related genotypes. The predominance of a single lineage within each patch could be the result of the accumulation of somatic mutations, limited dispersal, some sexual reproduction with partners mainly restricted to the same patch, or a combination of all three.
We found strong genetic structure among patches of L. chinensis. Consistent with previous work on the species, the clustering of similar genotypes within patches suggests that clonal reproduction combined with somatic mutation, limited dispersal, and some degree of sexual reproduction among neighbors causes individuals within a patch to be more closely related than among patches.
景观上遗传多样性的分布具有关键的生态和进化意义。对于基础植物物种来说,这在局部尺度上可能尤其如此,因为它们创造和定义了生态群落,对生态系统功能的贡献不成比例。
我们检查了遗传多样性和克隆的分布,我们首先将克隆定义为独特的多位点基因型 (MLG),然后通过将相似的 MLG 分组为多位点谱系。我们使用了来自 13 个斑块的 358 个分株的 186 个来自简单序列重复(ISSR)的标记。我们研究了遗传多样性和克隆多样性之间的关系,它们随斑块大小的变化,以及用于评估该物种遗传多样性和结构的标记数量的影响。
每个分株都有一个独特的 MLG。几乎所有斑块都由属于单个多位点谱系的个体组成。我们使用聚类算法来分组相关基因型来证实这一点。每个斑块中单一谱系的优势可能是体细胞突变的积累、有限的扩散、主要与同一斑块内的伴侣进行的一些有性繁殖、或三者的结合。
我们发现了 L. chinensis 斑块之间存在强烈的遗传结构。与该物种以前的工作一致,斑块内相似基因型的聚类表明克隆繁殖与体细胞突变、有限的扩散以及邻居之间一定程度的有性繁殖相结合,导致斑块内的个体比斑块之间的个体更密切相关。