Department of Biotechnology, Jamia Millia Islamia, New Delhi, India.
Centre for Interdisciplinary Research in Basic Sciences, Jamia Millia Islamia, New Delhi, India.
J Cell Biochem. 2022 Feb;123(2):259-274. doi: 10.1002/jcb.30162. Epub 2021 Oct 12.
The treatments available for non-small cell lung cancer exert various side effects in patients, and the burden of treatment cost is high. Therefore, exploring the alternative system of medicines, including therapies based on natural compounds, has become inevitable in developing anticancer therapeutics. This study used an integrated approach involving in-silico and in-vitro methods to explore natural compounds targeting Bax and Bcl2 for their apoptotic potential. Molecular docking followed by molecular dynamics (MD) simulation of thymoquinone (Tq) and quercetin (Qu) with Bax and Bcl2 were carried out to explore their interactions and stability under explicit solvent conditions. Tq and Qu showed appreciable binding affinities toward Bax (-6.2 and -7.1 kcal/mol, respectively) and Bcl2 (-5.6 and -6.4 kcal/mol, respectively) with well-organized conformational fitting compatibility. The MD simulation results revealed the development of stable complexes maintained by various noncovalent interactions that were preserved throughout the 100 ns trajectories. Further studies with these compounds were carried out using various in-vitro experimental approaches like MTT assay, apoptotic assay, and Western blot. IC values of Tq and Qu alone in A549 cells were found to be 45.78 and 35.69 µM, while in combination, it comes down to 22.49 µM, which is quite impressive. Similarly, in apoptosis assay, a combination of Tq and Qu shows 50.9% early apoptosis compared to Tq (40.6%) and Qu (33.3%) when taken alone. These assays signify their apoptotic induction potential, whereas both compounds significantly reduce the expression of antiapoptotic protein Bcl2 and induce proapoptotic Bax, suggestive of sensitizing NSCLS cells toward apoptosis.
可供非小细胞肺癌患者使用的治疗方法会产生各种副作用,且治疗费用负担较高。因此,在开发抗癌疗法时,探索替代医学体系,包括基于天然化合物的疗法,已成为必然。本研究采用了一种综合方法,包括计算机模拟和体外方法,以研究针对 Bax 和 Bcl2 的天然化合物的凋亡潜力。对百里醌(Tq)和槲皮素(Qu)与 Bax 和 Bcl2 进行分子对接,然后进行分子动力学(MD)模拟,以研究它们在明溶剂条件下的相互作用和稳定性。Tq 和 Qu 对 Bax(分别为-6.2 和-7.1 kcal/mol)和 Bcl2(分别为-5.6 和-6.4 kcal/mol)表现出相当大的结合亲和力,并且构象适应性良好。MD 模拟结果表明,在 100 ns 轨迹中,各种非共价相互作用稳定了复合物的形成。使用 MTT 测定法、凋亡测定法和 Western blot 等各种体外实验方法进一步研究了这些化合物。发现 Tq 和 Qu 单独在 A549 细胞中的 IC 值分别为 45.78 和 35.69 μM,而联合使用时则降至 22.49 μM,效果非常显著。同样,在凋亡测定中,与 Tq(40.6%)和 Qu(33.3%)单独使用相比,Tq 和 Qu 的组合可诱导 50.9%的早期凋亡。这些测定表明了它们的诱导凋亡潜力,而这两种化合物均能显著降低抗凋亡蛋白 Bcl2 的表达,并诱导促凋亡 Bax,提示 NSCLS 细胞对凋亡敏感。