• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验

一种原核核糖体蛋白的晶体结构

Crystal structure of a prokaryotic ribosomal protein.

作者信息

Wilson K S, Appelt K, Badger J, Tanaka I, White S W

出版信息

Proc Natl Acad Sci U S A. 1986 Oct;83(19):7251-5. doi: 10.1073/pnas.83.19.7251.

DOI:10.1073/pnas.83.19.7251
PMID:3463963
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC386693/
Abstract

The structure of ribosomal protein L30 from Bacillus stearothermophilus has been solved to a resolution of 2.5 A. The molecule is somewhat elongated and contains two helices and a three-stranded, anti-parallel beta-pleated sheet. The protein fold, in which helices pack on the same side of the sheet, generates a simple helix-sheet, two-layered motif. It is possible to distinguish three hydrophobic patches on the molecular surface, and one end has six isolated arginine and lysine residues. It is proposed that these reflect sites of protein-protein and protein-RNA interaction, respectively. The protein fold is very similar to that of the only other known ribosomal protein structure, L7/L12 from Escherichia coli, and, based on this similarity, an attempt is made to align the amino acid sequences of the two proteins.

摘要

嗜热脂肪芽孢杆菌核糖体蛋白L30的结构已解析至2.5埃的分辨率。该分子略显细长,包含两个螺旋和一个三股反平行β折叠片层。蛋白质折叠中,螺旋堆积在片层的同一侧,形成了一个简单的螺旋-片层两层基序。在分子表面可以区分出三个疏水斑块,一端有六个孤立的精氨酸和赖氨酸残基。据推测,这些分别反映了蛋白质-蛋白质和蛋白质-RNA相互作用的位点。该蛋白质折叠与另一种已知的核糖体蛋白结构——大肠杆菌的L7/L12非常相似,并基于这种相似性尝试对这两种蛋白质的氨基酸序列进行比对。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/a29e/386693/8bb67eaf184b/pnas00323-0133-a.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/a29e/386693/6eeeb8715dae/pnas00323-0132-a.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/a29e/386693/f4becafb2fda/pnas00323-0132-b.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/a29e/386693/8bb67eaf184b/pnas00323-0133-a.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/a29e/386693/6eeeb8715dae/pnas00323-0132-a.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/a29e/386693/f4becafb2fda/pnas00323-0132-b.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/a29e/386693/8bb67eaf184b/pnas00323-0133-a.jpg

相似文献

1
Crystal structure of a prokaryotic ribosomal protein.一种原核核糖体蛋白的晶体结构
Proc Natl Acad Sci U S A. 1986 Oct;83(19):7251-5. doi: 10.1073/pnas.83.19.7251.
2
Structural comparison of the prokaryotic ribosomal proteins L7/L12 and L30.原核生物核糖体蛋白L7/L12和L30的结构比较。
Proteins. 1988;3(4):243-51. doi: 10.1002/prot.340030405.
3
Crystal structure of prokaryotic ribosomal protein L9: a bi-lobed RNA-binding protein.原核核糖体蛋白L9的晶体结构:一种双叶RNA结合蛋白。
EMBO J. 1994 Jan 1;13(1):205-12. doi: 10.1002/j.1460-2075.1994.tb06250.x.
4
Structure of ribosomal protein L30 from Thermus thermophilus at 1.9 A resolution: conformational flexibility of the molecule.嗜热栖热菌核糖体蛋白L30在1.9埃分辨率下的结构:分子的构象灵活性
Acta Crystallogr D Biol Crystallogr. 1999 Nov;55(Pt 11):1827-33. doi: 10.1107/s0907444999010227.
5
The crystal structure of ribosomal protein L14 reveals an important organizational component of the translational apparatus.核糖体蛋白L14的晶体结构揭示了翻译装置的一个重要组织成分。
Structure. 1996 Jan 15;4(1):55-66. doi: 10.1016/s0969-2126(96)00009-3.
6
Proteins of the Bacillus stearothermophilus ribosome. A low resolution crystal analysis of protein L30.嗜热脂肪芽孢杆菌核糖体的蛋白质。蛋白质L30的低分辨率晶体分析。
FEBS Lett. 1983 Aug 22;160(1-2):72-4. doi: 10.1016/0014-5793(83)80938-7.
7
Ribosomal protein L7/L12 has a helix-turn-helix motif similar to that found in DNA-binding regulatory proteins.核糖体蛋白L7/L12具有一种螺旋-转角-螺旋基序,类似于在DNA结合调节蛋白中发现的基序。
Nucleic Acids Res. 1989 May 25;17(10):3757-62. doi: 10.1093/nar/17.10.3757.
8
The crystal structure of ribosomal protein S4 reveals a two-domain molecule with an extensive RNA-binding surface: one domain shows structural homology to the ETS DNA-binding motif.核糖体蛋白S4的晶体结构揭示了一个具有广泛RNA结合表面的双结构域分子:其中一个结构域显示出与ETS DNA结合基序的结构同源性。
EMBO J. 1998 Aug 17;17(16):4545-58. doi: 10.1093/emboj/17.16.4545.
9
Crystal structure of ribosomal protein S8 from Thermus thermophilus reveals a high degree of structural conservation of a specific RNA binding site.嗜热栖热菌核糖体蛋白S8的晶体结构揭示了特定RNA结合位点的高度结构保守性。
J Mol Biol. 1998 May 29;279(1):233-44. doi: 10.1006/jmbi.1998.1758.
10
The structure of ribosomal protein S5 reveals sites of interaction with 16S rRNA.核糖体蛋白S5的结构揭示了其与16S rRNA的相互作用位点。
Nature. 1992 Aug 27;358(6389):768-71. doi: 10.1038/358768a0.

引用本文的文献

1
Crystallization and preliminary crystallographic studies of L30e, a ribosomal protein from Methanocaldococcus jannaschii (MJ1044).詹氏甲烷球菌(MJ1044)核糖体蛋白L30e的结晶及初步晶体学研究
Acta Crystallogr Sect F Struct Biol Cryst Commun. 2008 Feb 1;64(Pt 2):102-4. doi: 10.1107/S1744309108000341. Epub 2008 Jan 31.
2
Crystal structure of the YajQ protein from Haemophilus influenzae reveals a tandem of RNP-like domains.流感嗜血杆菌YajQ蛋白的晶体结构揭示了一个类似核糖核蛋白结构域的串联结构。
J Struct Funct Genomics. 2003;4(1):1-9. doi: 10.1023/a:1024620416876.
3
Crystal structure of the RNA binding ribosomal protein L1 from Thermus thermophilus.

本文引用的文献

1
Crystal structure of a ribosomal component at 2.6 A resolution.核糖体组分的晶体结构,分辨率为2.6埃。
Nature. 1980 Aug 21;286(5775):824-6. doi: 10.1038/286824a0.
2
Functional organization of the large ribosomal subunit of Bacillus stearothermophilus.嗜热脂肪芽孢杆菌大核糖体亚基的功能组织
J Biol Chem. 1981 Oct 10;256(19):10105-10.
3
Structure, assembly, and function of ribosomes.核糖体的结构、组装及功能
嗜热栖热菌RNA结合核糖体蛋白L1的晶体结构
EMBO J. 1996 Mar 15;15(6):1350-9.
4
Crystal structure of prokaryotic ribosomal protein L9: a bi-lobed RNA-binding protein.原核核糖体蛋白L9的晶体结构:一种双叶RNA结合蛋白。
EMBO J. 1994 Jan 1;13(1):205-12. doi: 10.1002/j.1460-2075.1994.tb06250.x.
5
Ribosomal protein L6: structural evidence of gene duplication from a primitive RNA binding protein.核糖体蛋白L6:原始RNA结合蛋白基因复制的结构证据。
EMBO J. 1993 Dec 15;12(13):4901-8. doi: 10.1002/j.1460-2075.1993.tb06184.x.
6
Crystal structure of the ribosomal protein S6 from Thermus thermophilus.嗜热栖热菌核糖体蛋白S6的晶体结构
EMBO J. 1994 Mar 15;13(6):1249-54. doi: 10.2210/pdb1ris/pdb.
7
X-ray crystallography shows that translational initiation factor IF3 consists of two compact alpha/beta domains linked by an alpha-helix.
EMBO J. 1995 Aug 15;14(16):4056-64. doi: 10.1002/j.1460-2075.1995.tb00077.x.
8
Protein-rRNA binding features and their structural and functional implications in ribosomes as determined by cross-linking studies.通过交联研究确定的核糖体中蛋白质-rRNA结合特征及其结构和功能意义。
EMBO J. 1995 Sep 15;14(18):4578-88. doi: 10.1002/j.1460-2075.1995.tb00137.x.
9
A novel RNA-binding motif in omnipotent suppressors of translation termination, ribosomal proteins and a ribosome modification enzyme?翻译终止的全能抑制因子、核糖体蛋白和核糖体修饰酶中一种新的RNA结合基序?
Nucleic Acids Res. 1994 Jun 11;22(11):2166-7. doi: 10.1093/nar/22.11.2166.
10
Modelling by homology of RNA binding domain.
Mol Biol Rep. 1990;14(2-3):87-8. doi: 10.1007/BF00360427.
Curr Top Microbiol Immunol. 1982;97:81-155. doi: 10.1007/978-3-642-68318-3_3.
4
Ribosomal components from Escherichia coli 50 S subunits involved in the reconstitution of peptidyltransferase activity.来自大肠杆菌50S亚基的核糖体成分参与肽基转移酶活性的重建。
J Biol Chem. 1981 Mar 10;256(5):2284-8.
5
Sequence homologies among E. coli ribosomal proteins: evidence for evolutionarily related groupings and internal duplications.大肠杆菌核糖体蛋白之间的序列同源性:进化相关分组和内部重复的证据。
J Mol Evol. 1980 May;15(2):129-48. doi: 10.1007/BF01732666.
6
Proteins of the Bacillus stearothermophilus ribosome. Crystallization of protein L6.嗜热脂肪芽孢杆菌核糖体的蛋白质。蛋白质L6的结晶
FEBS Lett. 1983 Aug 22;160(1-2):75-7. doi: 10.1016/0014-5793(83)80939-9.
7
Proteins of the Bacillus stearothermophilus ribosome. A low resolution crystal analysis of protein L30.嗜热脂肪芽孢杆菌核糖体的蛋白质。蛋白质L30的低分辨率晶体分析。
FEBS Lett. 1983 Aug 22;160(1-2):72-4. doi: 10.1016/0014-5793(83)80938-7.
8
Proteins of the Bacillus stearothermophilus ribosome. Crystallization of proteins L30 and S5.
J Biol Chem. 1983 Nov 10;258(21):13328-30.
9
Proteins of the Bacillus stearothermophilus ribosome. A 5 A structure analysis of protein S5.
FEBS Lett. 1983 Oct 31;163(1):73-5. doi: 10.1016/0014-5793(83)81166-1.
10
On the statistical significance of homologous structures among the Escherichia coli ribosomal proteins.关于大肠杆菌核糖体蛋白中同源结构的统计学意义
Mol Gen Genet. 1984;196(3):439-48. doi: 10.1007/BF00436191.