Friedrich-Loeffler-Institut, Federal Research Institute for Animal Health, Institute of Epidemiology, Südufer 10, 17493, Greifswald-Insel Riems, Germany.
Universität Hohenheim, Institut Für Biologie, Fachgebiet Parasitologie, Emil-Wolff-Straße 34, 70599, Stuttgart, Germany.
Parasit Vectors. 2021 Oct 14;14(1):535. doi: 10.1186/s13071-021-05038-0.
Alveolar echinococcosis (AE) is a clinically serious zoonosis caused by the fox tapeworm Echinococcus multilocularis. We studied the diversity and the distribution of genotypes of E. multilocularis isolated from foxes in Brandenburg, Germany, and in comparison to a hunting ground in North Rhine-Westphalia.
Echinococcus multilocularis specimens from 101 foxes, 91 derived from Brandenburg and 10 derived from North Rhine-Westphalia, were examined. To detect potential mixed infections with different genotypes of E. multilocularis, five worms per fox were analyzed. For genotyping, three mitochondrial markers, namely cytochrome c oxidase subunit 1 (Cox1), NADH dehydrogenase subunit 1 (Nad1), and ATP synthase subunit 6 (ATP6), and the nuclear microsatellite marker EmsB were used. To identify nucleotide polymorphisms, the mitochondrial markers were sequenced and the data were compared, including with published sequences from other regions. EmsB fragment length profiles were determined and confirmed by Kohonen network analysis and grouping of Sammon's nonlinear mapping with k-means clustering. The spatial distribution of genotypes was analyzed by SaTScan for the EmsB profiles found in Brandenburg.
With both the mitochondrial makers and the EmsB microsatellite fragment length profile analyses, mixed infections with different E. multilocularis genotypes were detected in foxes from Brandenburg and North Rhine-Westphalia. Genotyping using the mitochondrial markers showed that the examined parasite specimens belong to the European haplotype of E. multilocularis, but a detailed spatial analysis was not possible due to the limited heterogeneity of these markers in the parasite population. Four (D, E, G, and H) out of the five EmsB profiles described in Europe so far were detected in the samples from Brandenburg and North Rhine-Westphalia. The EmsB profile G was the most common. A spatial cluster of the E. multilocularis genotype with the EmsB profile G was found in northeastern Brandenburg, and a cluster of profile D was found in southern parts of this state.
Genotyping of E. multilocularis showed that individual foxes may harbor different genotypes of the parasite. EmsB profiles allowed the identification of spatial clusters, which may help in understanding the distribution and spread of the infection in wildlife, and in relatively small endemic areas.
泡型包虫病(AE)是一种由狐狸绦虫多房棘球绦虫引起的严重临床动物源性传染病。我们研究了德国勃兰登堡州和北莱茵-威斯特法伦州的狐狸中分离出的多房棘球绦虫的基因型多样性和分布,并与北莱茵-威斯特法伦州的一个狩猎场进行了比较。
对 101 只狐狸(91 只来自勃兰登堡州,10 只来自北莱茵-威斯特法伦州)的多房棘球蚴标本进行了检测。为了检测不同基因型多房棘球绦虫的潜在混合感染,每只狐狸分析了 5 条虫。为了基因分型,使用了三个线粒体标记物,即细胞色素 c 氧化酶亚基 1(Cox1)、NADH 脱氢酶亚基 1(Nad1)和 ATP 合酶亚基 6(ATP6),以及核微卫星标记 EmsB。为了鉴定核苷酸多态性,对线粒体标记物进行了测序,并与包括其他地区发表的序列在内的序列进行了比较。通过 Kohonen 网络分析和 Sammon 的非线性映射与 k-均值聚类的分组确定了 EmsB 片段长度谱,并进行了确认。使用 SaTScan 分析了在勃兰登堡州发现的 EmsB 图谱的基因型空间分布。
线粒体标记物和 EmsB 微卫星片段长度谱分析均显示,来自勃兰登堡州和北莱茵-威斯特法伦州的狐狸存在不同基因型的多房棘球绦虫混合感染。线粒体标记物的基因分型显示,所检查的寄生虫标本属于欧洲多房棘球绦虫的单倍型,但由于寄生虫种群中这些标记物的异质性有限,因此无法进行详细的空间分析。在来自勃兰登堡州和北莱茵-威斯特法伦州的样本中检测到了到目前为止在欧洲描述的五个 EmsB 图谱中的四个(D、E、G 和 H)。EmsB 图谱 G 最为常见。在勃兰登堡州东北部发现了具有 EmsB 图谱 G 的多房棘球蚴基因型的空间聚类,在该州南部发现了具有 EmsB 图谱 D 的聚类。
多房棘球绦虫的基因分型表明,个别狐狸可能携带不同基因型的寄生虫。EmsB 图谱可用于识别空间聚类,这有助于了解野生动物感染的分布和传播,以及在相对较小的地方病流行地区。