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核心技术专利:CN118964589B侵权必究
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Improved broad-spectrum antibiotics against Gram-negative pathogens darobactin biosynthetic pathway engineering.

作者信息

Groß Sebastian, Panter Fabian, Pogorevc Domen, Seyfert Carsten E, Deckarm Selina, Bader Chantal D, Herrmann Jennifer, Müller Rolf

机构信息

Helmholtz Institute for Pharmaceutical Research Saarland (HIPS), Helmholtz Centre for Infection Research, Saarland University Campus 66123 Saarbrücken Germany

Department of Pharmacy, Saarland University 66123 Saarbrücken Germany.

出版信息

Chem Sci. 2021 Aug 12;12(35):11882-11893. doi: 10.1039/d1sc02725e. eCollection 2021 Sep 15.


DOI:10.1039/d1sc02725e
PMID:34659729
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC8442675/
Abstract

The development of new antibiotics is imperative to fight increasing mortality rates connected to infections caused by multidrug-resistant (MDR) bacteria. In this context, Gram-negative pathogens listed in the WHO priority list are particularly problematic. Darobactin is a ribosomally produced and post-translationally modified bicyclic heptapeptide antibiotic selectively killing Gram-negative bacteria by targeting the outer membrane protein BamA. The native darobactin A producer HGB1456 shows very limited production under laboratory cultivation conditions. Herein, we present the design and heterologous expression of a synthetically engineered darobactin biosynthetic gene cluster (BGC) in to reach an average darobactin A production titre of 13.4 mg L. Rational design of variants, encoding the darobactin precursor peptide with altered core sequences, resulted in the production of 13 new 'non-natural' darobactin derivatives and 4 previously hypothetical natural darobactins. One of the non-natural compounds, darobactin 9, was more potent than darobactin A, and showed significantly improved activity especially against (0.125 μg mL) and (1-2 μg mL). Importantly, it also displayed superior activity against MDR clinical isolates of . (1-2 μg mL) and (1-4 μg mL). Independent deletions of genes from the darobactin BGC showed that only and , encoding a radical forming -adenosyl-l-methionine-dependent enzyme, are required for darobactin formation. Co-expression of two additional genes associated with the BGCs in hypothetical producer strains identified a proteolytic detoxification mechanism as a potential self-resistance strategy in native producers. Taken together, we describe a versatile heterologous darobactin platform allowing the production of unprecedented active derivatives in good yields, and we provide first experimental evidence for darobactin biosynthesis processes.

摘要
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/916d/8442675/8e414fdafe4f/d1sc02725e-f5.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/916d/8442675/ec417f6b57c1/d1sc02725e-f1.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/916d/8442675/7a1364246983/d1sc02725e-f2.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/916d/8442675/a71a6c760e28/d1sc02725e-f3.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/916d/8442675/e7751e451798/d1sc02725e-f4.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/916d/8442675/8e414fdafe4f/d1sc02725e-f5.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/916d/8442675/ec417f6b57c1/d1sc02725e-f1.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/916d/8442675/7a1364246983/d1sc02725e-f2.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/916d/8442675/a71a6c760e28/d1sc02725e-f3.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/916d/8442675/e7751e451798/d1sc02725e-f4.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/916d/8442675/8e414fdafe4f/d1sc02725e-f5.jpg

相似文献

[1]
Improved broad-spectrum antibiotics against Gram-negative pathogens darobactin biosynthetic pathway engineering.

Chem Sci. 2021-8-12

[2]
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[3]
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[4]
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[5]
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[6]
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[7]
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[8]
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[9]
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[10]
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本文引用的文献

[1]
Optimization of heterologous Darobactin A expression and identification of the minimal biosynthetic gene cluster.

Metab Eng. 2021-7

[2]
The antibiotic darobactin mimics a β-strand to inhibit outer membrane insertase.

Nature. 2021-5

[3]
Activation modes in biocatalytic radical cyclization reactions.

J Ind Microbiol Biotechnol. 2021-6-4

[4]
Biosynthesis of Cittilins, Unusual Ribosomally Synthesized and Post-translationally Modified Peptides from .

ACS Chem Biol. 2020-8-21

[5]
Critical analysis of antibacterial agents in clinical development.

Nat Rev Microbiol. 2020-3-9

[6]
Imipenem-Cilastatin-Relebactam: A Novel β-Lactam-β-Lactamase Inhibitor Combination for the Treatment of Multidrug-Resistant Gram-Negative Infections.

Pharmacotherapy. 2020-4

[7]
A new antibiotic selectively kills Gram-negative pathogens.

Nature. 2019-11-20

[8]
Chimeric peptidomimetic antibiotics against Gram-negative bacteria.

Nature. 2019-10-23

[9]
A small-molecule inhibitor of BamA impervious to efflux and the outer membrane permeability barrier.

Proc Natl Acad Sci U S A. 2019-10-7

[10]
Production optimization and biosynthesis revision of corallopyronin A, a potent anti-filarial antibiotic.

Metab Eng. 2019-7-21

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