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西班牙南部口腔癌样本中p53基因外显子的突变

Mutations in p53 Gene Exons in a Sample from the South of Spain in Oral Cancer.

作者信息

Martín-Lozano Guiomar, Gómez-Díaz Raquel, Iglesías-Martín Fernando, Torres-Lagares Daniel, Gutiérrez-Corrales Aida, Gutiérrez-Pérez José-Luis

机构信息

Oral and Maxillofacial Surgery Unit, Virgen del Rocío University Hospital, Seville, Spain.

Instituto de Biomedicina de Sevilla, Seville, Spain.

出版信息

J Clin Exp Dent. 2021 Oct 1;13(10):e1001-e1005. doi: 10.4317/jced.58799. eCollection 2021 Oct.

Abstract

BACKGROUND

Cancer is a genetic disease caused by mutations in DNA and epigenetic alterations that control gene expression. The majority of epidermoid carcinomas develop within the fields of epithelial genetic alterations. The mechanisms underlying tumorigenesis of epidermoid carcinoma are as yet unknown; therefore, precise identification of the risk factors is needed. Aim: The main aim of this study is to analyse and identify the emergence of the mutations described in the literature of the p53 gene with regard to the emergence of cancer in a sample of dysplastic and cancerous lesions in oral cavity mucosa in the population of the south of Spain, in order to determine the presence of said mutations and the percentage of them in our population.

MATERIAL AND METHODS

A cross-sectional study was carried out, with a sample size of 22 patients with potentially malignant oral lesions ancillary to biopsy. All were patients, of both sexes, over 18 years of age from the Virgen del Rocío University Hospital with potentially malignant lesions in oral mucosa ancillary to biopsy (leukoplakias, erythroplasias or leukoerythopkias). An anatomopathological study was performed on all the samples and the lesions were divided into three types: low-grade dysplasia, high-grade dysplasia and squamous cell carcinoma. In respect of the genome study process, a complete search or scan for mutations in exons 5, 6, 8 and 9 of the p 53 gene was carried out, given that in the IARC database we observed that the 5 and 6 as well as the 8 and 9 exon sizes can be scanned completely in this way, since they have amplificon sizes of 476 and 445 base pairs respectively.

RESULTS

In the scan for the complete exons 5, 6, 8 and 9 only a single result of interest was found to be described. In patient NBI 57 a change was observed in the TAT triplet by ATT of EXON 6, the change being of the T nucleotide by the A and in both directions both in Forward and Reverse. The exact location in the NCBI is GR Ch 37 p13 on chromosome 17, EXON 6 of the P53 gene and the change is in the C.613 T>A nucleotide; NM_000546.

CONCLUSIONS

On reviewing this genetic variant in different scientific databases, such as ENSEMBL among others, in at least 6 different biocomputing tools it is described as a pathogen, therefore we can conclude that it is a pathogenic mutation for this case in particular. The rest of the mutations described in the literature on exons 5, 6, 8 and 9 of the p53 gene have not been found in our sample. Oral cancer, p53, Mutations, Exon.

摘要

背景

癌症是一种由DNA突变和控制基因表达的表观遗传改变引起的基因疾病。大多数表皮样癌发生在上皮基因改变的区域内。表皮样癌的肿瘤发生机制尚不清楚;因此,需要精确识别风险因素。目的:本研究的主要目的是分析和识别西班牙南部人群口腔黏膜发育异常和癌性病变样本中,与癌症发生相关的p53基因文献中所述突变的出现情况,以确定这些突变在我们人群中的存在情况及其所占百分比。

材料与方法

进行了一项横断面研究,样本量为22例接受活检辅助的口腔潜在恶性病变患者。所有患者均为来自罗西奥圣母大学医院的18岁以上男女患者,患有活检辅助的口腔黏膜潜在恶性病变(白斑、红斑或红白斑)。对所有样本进行了解剖病理学研究,病变分为三种类型:低级别发育异常、高级别发育异常和鳞状细胞癌。在基因组研究过程中,鉴于在国际癌症研究机构(IARC)数据库中我们观察到,可以通过这种方式完整扫描p53基因第5、6、8和9外显子的突变,因为它们的扩增子大小分别为476和445个碱基对,所以对p53基因的第5、6、8和9外显子进行了全面搜索或扫描以查找突变。

结果

在对第5、6、8和9外显子的完整扫描中,仅发现了一个有意义的结果。在患者NBI 57中,观察到第6外显子的TAT三联体由ATT改变,即T核苷酸被A取代,并且在正向和反向两个方向均发生改变。在NCBI中的准确位置是17号染色体上的GR Ch 37 p13,P53基因的第6外显子,该改变为C.613 T>A核苷酸;NM_000546。

结论

在不同的科学数据库(如ENSEMBL等)中查看此基因变异时,在至少6种不同的生物计算工具中它被描述为病原体,因此我们可以得出结论,就该病例而言它是一种致病突变。在我们的样本中未发现p53基因第5、6、8和9外显子文献中描述的其他突变。口腔癌、p53、突变、外显子。

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