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采用病毒富集平台的快速新冠病毒分子诊断系统

Rapid COVID-19 Molecular Diagnostic System Using Virus Enrichment Platform.

作者信息

Jang Yoon Ok, Lee Hyo Joo, Koo Bonhan, Cha Hye-Hee, Kwon Ji-Soo, Kim Ji Yeun, Kim Myoung Gyu, Kim Hyun Soo, Kim Sung-Han, Shin Yong

机构信息

Department of Biotechnology, College of Life Science and Biotechnology, Yonsei University, Seoul 03722, Korea.

Department of Infectious Diseases, Asan Medical Center, University of Ulsan College of Medicine, Songpa-gu, Seoul 05505, Korea.

出版信息

Biosensors (Basel). 2021 Oct 6;11(10):373. doi: 10.3390/bios11100373.

DOI:10.3390/bios11100373
PMID:34677329
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC8534047/
Abstract

The coronavirus disease 2019 (COVID-19) pandemic, caused by the severe acute respiratory syndrome coronavirus (SARS-CoV)-2, is rapidly spreading and severely straining the capacities of public health communities and systems around the world. Therefore, accurate, rapid, and robust diagnostic tests for COVID-19 are crucial to prevent further spread of the infection, alleviate the burden on healthcare and diagnostic facilities, and ensure timely therapeutic intervention. To date, several detection methods based on nucleic acid amplification have been developed for the rapid and accurate detection of SARS-CoV-2. Despite the myriad of advancements in the detection methods for SARS-CoV-2, rapid sample preparation methods for RNA extraction from viruses have rarely been explored. Here, we report a rapid COVID-19 molecular diagnostic system that combines a self-powered sample preparation assay and loop-mediated isothermal amplification (LAMP) based naked-eye detection method for the rapid and sensitive detection of SARS-CoV-2. The self-powered sample preparation assay with a hydrophilic polyvinylidene fluoride filter and dimethyl pimelimidate can be operated by hand, without the use of any sophisticated instrumentation, similar to the reverse transcription (RT)-LAMP-based lateral flow assay for the naked-eye detection of SARS-CoV-2. The COVID-19 molecular diagnostic system enriches the virus population, extracts and amplifies the target RNA, and detects SARS-CoV-2 within 60 min. We validated the accuracy of the system by using 23 clinical nasopharyngeal specimens. We envision that this proposed system will enable simple, facile, efficient, and inexpensive diagnosis of COVID-19 at home and the clinic as a pre-screening platform to reduce the burden on the medical staff in this pandemic era.

摘要

由严重急性呼吸综合征冠状病毒2(SARS-CoV-2)引起的2019冠状病毒病(COVID-19)大流行正在迅速蔓延,给世界各地的公共卫生社区和系统带来了巨大压力。因此,针对COVID-19的准确、快速且可靠的诊断测试对于防止感染的进一步传播、减轻医疗保健和诊断设施的负担以及确保及时的治疗干预至关重要。迄今为止,已经开发了几种基于核酸扩增的检测方法用于快速准确地检测SARS-CoV-2。尽管在SARS-CoV-2检测方法方面取得了众多进展,但从病毒中提取RNA的快速样本制备方法却很少被探索。在此,我们报告了一种快速的COVID-19分子诊断系统,该系统结合了自供电样本制备测定法和基于环介导等温扩增(LAMP)的肉眼检测方法,用于快速灵敏地检测SARS-CoV-2。使用亲水性聚偏二氟乙烯过滤器和庚二酸二甲酯的自供电样本制备测定法可以手动操作,无需使用任何复杂仪器,类似于用于SARS-CoV-2肉眼检测的基于逆转录(RT)-LAMP的侧向流动测定法。该COVID-19分子诊断系统可富集病毒群体,提取并扩增目标RNA,并在60分钟内检测出SARS-CoV-2。我们使用23份临床鼻咽拭子样本验证了该系统的准确性。我们设想,这一提出的系统将能够在家庭和诊所实现简单、便捷、高效且廉价的COVID-19诊断,作为一种预筛查平台,以减轻大流行时代医护人员的负担。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/37ad/8534047/edf3b36ca4cf/biosensors-11-00373-g006.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/37ad/8534047/869114414176/biosensors-11-00373-g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/37ad/8534047/5cd4c1fe394f/biosensors-11-00373-g002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/37ad/8534047/8f26740ffb96/biosensors-11-00373-g003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/37ad/8534047/17858b0e0291/biosensors-11-00373-g004.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/37ad/8534047/77d1b0b8c3ef/biosensors-11-00373-g005.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/37ad/8534047/edf3b36ca4cf/biosensors-11-00373-g006.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/37ad/8534047/869114414176/biosensors-11-00373-g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/37ad/8534047/5cd4c1fe394f/biosensors-11-00373-g002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/37ad/8534047/8f26740ffb96/biosensors-11-00373-g003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/37ad/8534047/17858b0e0291/biosensors-11-00373-g004.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/37ad/8534047/77d1b0b8c3ef/biosensors-11-00373-g005.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/37ad/8534047/edf3b36ca4cf/biosensors-11-00373-g006.jpg

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