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高分辨率(mtDNA)熔解分析,用于简单高效地描述非洲化蜜蜂(膜翅目:蜜蜂科)。

High-resolution (mtDNA) melting analysis for simple and efficient characterization of Africanized honey bee Apis mellifera (Hymenoptera:Apidae).

机构信息

Instituto de Investigaciones en Producción Sanidad y Ambiente (IIPROSAM), CONICET-UNMdP, Centro de Asociación Simple CIC PBA, Mar del Plata, Argentina.

Centro de Investigación en Abejas Sociales, Facultad de Ciencias Exactas y Naturales, Universidad Nacional de Mar del Plata, Mar del Plata, Argentina.

出版信息

Genetica. 2021 Dec;149(5-6):343-350. doi: 10.1007/s10709-021-00139-1. Epub 2021 Oct 26.

Abstract

Analysis of the mtDNA variation in Apis mellifera L. has allowed distinguishing subspecies and evolutionary lineages by means of different molecular methods; from RFLP, to PCR-RFLP and direct sequencing. Likewise, geometric morphometrics (GM) has been used to distinguish Africanized honey bees with a high degree of consistency with studies using molecular information. High-resolution fusion analysis (HRM) allows one to quickly identify sequence polymorphisms by comparing DNA melting curves in short amplicons generated by real-time PCR (qPCR). The objective of this work was to implement the HRM technique in the diagnosis of Africanization of colonies of A. mellifera from Argentina, using GM as a validation method. DNA was extracted from 60 A. mellifera colonies for mitotype identification. Samples were initially analyzed by HRM, through qPCRs of two regions (485 bp/385 bp) of the mitochondrial cytochrome b gene (cytb). This technique was then optimizing to amplify a smaller PCR product (207 bp) for the HRM diagnosis for the Africanization of colonies. Of the 60 colony samples analyzed, 41 were classified as colonies of European origin whereas 19 revealed African origin. All the samples classified by HRM were correctly validated by GM, demonstrating that this technique could be implemented for a rapid identification of African mitotypes in Apis mellifera samples.

摘要

对蜜蜂 mtDNA 变异的分析,使得通过不同的分子方法可以区分亚种和进化谱系;从 RFLP 到 PCR-RFLP 再到直接测序。同样,几何形态计量学(GM)也被用于区分高度一致的非洲化蜜蜂与使用分子信息的研究。高分辨率融合分析(HRM)通过比较实时 PCR(qPCR)产生的短扩增子的 DNA 熔融曲线,可以快速识别序列多态性。本工作的目的是在阿根廷的 A. mellifera 群体的非洲化诊断中实施 HRM 技术,使用 GM 作为验证方法。从 60 个 A. mellifera 群体中提取 DNA 用于线粒体细胞色素 b 基因(cytb)的两个区域(485 bp/385 bp)的线粒体细胞色素 b 基因(cytb)的线粒体细胞色素 b 基因(cytb)的线粒体细胞色素 b 基因(cytb)的 mtDNA 变异分析。通过 HRM 分析,对两个区域(485 bp/385 bp)的线粒体细胞色素 b 基因(cytb)的 qPCR 来进行 HRM 分析。然后优化该技术,以扩增较小的 PCR 产物(207 bp)用于 HRM 诊断,以鉴定 A. mellifera 群体的非洲化。在分析的 60 个殖民地样本中,41 个被归类为欧洲起源的殖民地,而 19 个则显示出非洲起源。通过 HRM 分类的所有样本均通过 GM 正确验证,证明该技术可用于快速鉴定 Apis mellifera 样本中的非洲 mtDNA 型。

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