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全北区风铃草属植物(风铃草及其近缘属)的动态多样化历史及速率上升。

Dynamic diversification history with rate upshifts in Holarctic bell-flowers (Campanula and allies).

作者信息

Jones Katy E, Korotkova Nadja, Petersen Jörn, Henning Tilo, Borsch Thomas, Kilian Norbert

机构信息

Freie Universität Berlin Botanischer Garten und Botanisches Museum Berlin-Dahlem, Königin-Luise-Straße 6-8, Berlin, 14195, Germany.

出版信息

Cladistics. 2017 Dec;33(6):637-666. doi: 10.1111/cla.12187. Epub 2017 Feb 4.

Abstract

Campanula s.l. is one of the most speciose flowering plant lineages of the Holarctic (ca. 600 species). In the present study we sequenced three regions of the plastid genome (petD, rpl16 and trnK/matK) across a broad sample of Campanula s.l., which markedly improved phylogenetic resolution and statistical support compared to previous studies. Based on this robust phylogenetic hypothesis we estimated divergence times using BEAST, diversification rate shifts using Bayesian Analysis of Macroevolutionary Mixture (BAMM) and TreePar, and ancestral ranges using Biogeography with Bayesian (and likelihood) Evolutionary Analyses in R. Campanula s.l. is estimated to have originated during the Early Eocene but the major diversification events occurred between the Late Oligocene and Middle Miocene. Two upward diversification rate shifts were revealed by BAMM, specific to the crown nodes of two Campanula clades: CAM17, a mostly South European-SW Asian lineage originating during the Middle Miocene and containing nearly half of all known Campanula species; and CAM15B, a SW Asian-Sino-Himalayan lineage of nine species originating in the early Pleistocene. The dynamic diversification history of Campanula and the inferred rate shifts are discussed in a geo-historical context.

摘要

广义风铃草属是全北区(约600种)物种最为丰富的开花植物谱系之一。在本研究中,我们对广义风铃草属的大量样本进行了叶绿体基因组三个区域(petD、rpl16和trnK/matK)的测序,与之前的研究相比,这显著提高了系统发育分辨率和统计支持度。基于这个可靠的系统发育假说,我们使用BEAST估计分歧时间,使用贝叶斯宏观进化混合分析(BAMM)和TreePar估计多样化速率变化,并使用R语言中的贝叶斯(和似然)进化分析生物地理学估计祖先分布范围。广义风铃草属估计起源于始新世早期,但主要的多样化事件发生在渐新世晚期和中新世中期之间。BAMM揭示了两次多样化速率上升,分别特定于风铃草属两个分支的冠节点:CAM17,一个主要分布在南欧-西南亚的谱系,起源于中新世中期,包含近一半已知的风铃草属物种;以及CAM15B,一个由9个物种组成的西南亚-中国喜马拉雅谱系,起源于更新世早期。本文在地质历史背景下讨论了风铃草属动态的多样化历史以及推断出的速率变化。

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