Ronca Francesca, Raggi Antonio
Laboratory of Biochemistry, Department of Pathology, University of Pisa, via Roma 55, 56126 Pisa, Italy.
Biochim Biophys Acta Gen Subj. 2022 Feb;1866(2):130044. doi: 10.1016/j.bbagen.2021.130044. Epub 2021 Oct 25.
Skeletal muscle AMP deaminase (AMPD1) regulates the concentration of adenine nucleotides during muscle contraction. We previously provided evidence that rabbit AMPD1 is composed by two HPRG 73 kDa subunits and two 85 kDa catalytic subunits with a dinuclear zinc site with an average of two histidine residues at each metal site. AMPD1 is mainly expressed in fast twitching fibers and is inhibited by ATP. The limited trypsinization of the 95-residue N-terminal domain of rabbit AMPD1 desensitizes the enzyme towards ATP inhibition at the optimal pH 6.5, but not at pH 7.1.
The modified residues of rabbit AMPD1 after incubation with radioactive diethyl pyrocarbonate ([C]DEP) causing the desensitization to inhibition by ATP at pH 7.1 have been identified by sequence analysis and MS analysis of the radioactive peptides liberated from the carbethoxylated enzyme by limited proteolysis with trypsin.
The study confirms the presence of a dinuclear zinc site in rabbit AMPD1 and shows that carbethoxylation of His-51 at the N-terminus of the catalytic subunit removes the inhibition of the enzyme by ATP at pH 7.1.
The desensitization to ATP is due to the modification of His-51 of the Zn coordination sphere which is transduced in a conformational change of the enzyme C-terminus, where an ATP-binding site has been localized.
The progress in the study of the complex regulation of rabbit AMPD1 that shares an identical amino acid sequence with the human enzyme is important in relation to the role of the enzyme during mammalian evolution.
骨骼肌AMP脱氨酶(AMPD1)在肌肉收缩过程中调节腺嘌呤核苷酸的浓度。我们之前提供的证据表明,兔AMPD1由两个73 kDa的HPRG亚基和两个85 kDa的催化亚基组成,具有双核锌位点,每个金属位点平均有两个组氨酸残基。AMPD1主要在快肌纤维中表达,并受ATP抑制。兔AMPD1 95个残基的N端结构域经有限胰蛋白酶消化后,在最佳pH 6.5时使该酶对ATP抑制不敏感,但在pH 7.1时并非如此。
通过对经放射性焦碳酸二乙酯([C]DEP)孵育后的兔AMPD1进行序列分析和质谱分析,鉴定了导致其在pH 7.1时对ATP抑制脱敏的修饰残基。放射性焦碳酸二乙酯孵育后的兔AMPD1经胰蛋白酶有限水解后释放出放射性肽段。
该研究证实了兔AMPD1中存在双核锌位点,并表明催化亚基N端的His-51经乙氧羰基化后消除了该酶在pH 7.1时受ATP的抑制。
对ATP的脱敏是由于锌配位球中His-51的修饰,这种修饰导致了酶C端的构象变化,而ATP结合位点就位于C端。
兔AMPD1与人类酶具有相同的氨基酸序列,其复杂调控机制的研究进展对于该酶在哺乳动物进化过程中的作用具有重要意义。