Suppr超能文献

用于改善核磁共振晶体学工作流程的工具箱。

A toolbox for improving the workflow of NMR crystallography.

作者信息

Szell Patrick M J, Nilsson Lill Sten O, Blade Helen, Brown Steven P, Hughes Leslie P

机构信息

Department of Physics, University of Warwick, Coventry, CV4 7AL, UK.

Early Product Development and Manufacturing, Pharmaceutical Sciences, R&D, AstraZeneca, Gothenburg, Sweden.

出版信息

Solid State Nucl Magn Reson. 2021 Dec;116:101761. doi: 10.1016/j.ssnmr.2021.101761. Epub 2021 Oct 12.

Abstract

NMR crystallography is a powerful tool with applications in structural characterization and crystal structure verification, to name two. However, applying this tool presents several challenges, especially for industrial users, in terms of consistency, workflow, time consumption, and the requirement for a high level of understanding of experimental solid-state NMR and GIPAW-DFT calculations. Here, we have developed a series of fully parameterized scripts for use in Materials Studio and TopSpin, based on the .magres file format, with a focus on organic molecules (e.g. pharmaceuticals), improving efficiency, robustness, and workflow. We separate these tools into three major categories: performing the DFT calculations, extracting & visualizing the results, and crystallographic modelling. These scripts will rapidly submit fully parameterized CASTEP jobs, extract data from the calculations, assist in visualizing the results, and expedite the process of structural modelling. Accompanied with these tools is a description on their functionality, documentation on how to get started and use the scripts, and links to video tutorials for guiding new users. Through the use of these tools, we hope to facilitate NMR crystallography and to harmonize the process across users.

摘要

核磁共振晶体学是一种强大的工具,可用于结构表征和晶体结构验证等方面。然而,应用这一工具存在若干挑战,特别是对于工业用户而言,在一致性、工作流程、时间消耗以及对实验固态核磁共振和GIPAW-DFT计算的高水平理解要求方面。在此,我们基于.magres文件格式,开发了一系列用于Materials Studio和TopSpin的完全参数化脚本,重点针对有机分子(如药物),提高了效率、稳健性和工作流程。我们将这些工具分为三大类:执行DFT计算、提取和可视化结果以及晶体学建模。这些脚本将快速提交完全参数化的CASTEP作业,从计算中提取数据,协助可视化结果,并加快结构建模过程。随这些工具附带的有其功能描述、关于如何开始使用脚本的文档以及指向指导新用户的视频教程的链接。通过使用这些工具,我们希望促进核磁共振晶体学的发展,并使不同用户的流程趋于一致。

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验