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基于综合分子和形态学分析以及不同支持度测量的屋尘螨亚科危地马拉螨亚科(真螨目:尘螨科)的系统发育位置

Phylogenetic position of the house dust mite subfamily Guatemalichinae (Acariformes: Pyroglyphidae) based on integrated molecular and morphological analyses and different measures of support.

作者信息

Klimov Pavel B, Bochkov Andre V, OConnor Barry M

机构信息

Department of Ecology and Evolutionary Biology, Museum of Zoology, University of Michigan, 1109 Geddes Ave., Ann Arbor, MI, 48109, USA.

Faculty of Biology, Tyumen State University, 10 Semakova Str., Tyumen, 625003, Russia.

出版信息

Cladistics. 2016 Jun;32(3):261-275. doi: 10.1111/cla.12126. Epub 2015 Jun 15.

Abstract

Based on multilocus phylogenetic analyses (18S, 28S, EF1-α, SRP54, HSP70, CO1, 10 860 nt aligned), we show that the house dust mite subfamily Guatemalichinae is nested within non-onychalgine pyroglyphid mites and forms the sister group to the genus Sturnophagoides (bootstrap support 100, posterior probability 1.0). Because high bootstrap support values may be misleading in the presence of incongruence, we evaluate robustness of the Guatemalichinae+Sturnophagoides clade using: (1) internode certainty indices to estimate the frequency of conflicting bipartitions in maximum-likelihood bootstrap trees, (ii) consensus networks to investigate conflict among different loci; and (iii) statistical hypothesis testing based on information theory, both multi-scale and regular bootstrap. Results suggest that this grouping is very well supported given the data. The molecular analyses were integrated with detailed morphological study using scanning electron and light microscopy. We suggest that the subfamilial status of Guatemalichinae should be reconsidered, and this lineage should be placed within the subfamily Dermatophagoidinae. The latter subfamily is currently accepted in the literature as a monophyletic group but was here inferred as paraphyletic and was not supported by any morphological synapomorphy. The paraphyly involved the most species-rich and medically important genus, Dermatophagoides. Our findings suggest the need for a comprehensive revision of the higher-level relationships of pyroglyphid house dust mites using both DNA sequences and morphology coupled with a broad taxonomic sampling.

摘要

基于多位点系统发育分析(18S、28S、EF1-α、SRP54、HSP70、CO1,共比对10860个核苷酸),我们发现危地马拉尘螨亚科嵌套于非甲螨亚科的尘螨中,并构成了食星螨属的姐妹群(自展支持率为100,后验概率为1.0)。由于在存在不一致的情况下,较高的自展支持值可能会产生误导,因此我们使用以下方法评估危地马拉尘螨亚科+食星螨属分支的稳健性:(1)节点确定性指数,以估计最大似然自展树中冲突二分法的频率;(2)一致性网络,以研究不同基因座之间的冲突;(3)基于信息论的统计假设检验,包括多尺度和常规自展。结果表明,鉴于现有数据,这一分类得到了很好的支持。分子分析与使用扫描电子显微镜和光学显微镜的详细形态学研究相结合。我们建议重新考虑危地马拉尘螨亚科的亚科地位,并将该谱系置于皮屑螨亚科内。后一个亚科目前在文献中被认为是一个单系类群,但在这里被推断为并系类群,且没有任何形态学共衍征的支持。这种并系性涉及到物种最丰富且医学上最重要的皮屑螨属。我们的研究结果表明,需要使用DNA序列和形态学,并结合广泛的分类采样,对尘螨的高级别关系进行全面修订。

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