Li Wen, Kavatsyuk Oksana, Douma Wessel, Wang Xin, Hoekstra Ronnie, Mayer Dennis, Robinson Matthew S, Gühr Markus, Lalande Mathieu, Abdelmouleh Marwa, Ryszka Michal, Poully Jean Christophe, Schlathölter Thomas
University of Groningen, Zernike Institute for Advanced Materials Nijenborgh 4 9747AG Groningen Netherlands
University College Groningen Hoendiep 23/24 9718BG Groningen Netherlands.
Chem Sci. 2021 Sep 10;12(39):13177-13186. doi: 10.1039/d1sc02885e. eCollection 2021 Oct 13.
We have studied soft X-ray photoabsorption in the doubly deprotonated gas-phase oligonucleotide [dTGGGGT-2H]. The dominating decay mechanism of the X-ray induced inner shell vacancy was found to be Auger decay with detachment of at least three electrons, leading to charge reversal of the anionic precursor and the formation of positively charged photofragment ions. The same process is observed in heavy ion (12 MeV C) collisions with [dTGGGGT-2H] where inner shell vacancies are generated as well, but with smaller probability. Auger decay of a single K-vacancy in DNA, followed by detachment of three or more low energy electrons instead of a single high energy electron has profound implications for DNA damage and damage modelling. The production of three low kinetic energy electrons with short mean free path instead of one high kinetic energy electron with long mean free path implies that electron-induced DNA damage will be much more localized around the initial K-shell vacancy. The fragmentation channels, triggered by triple electron detachment Auger decay are predominantly related to protonated guanine base loss and even loss of protonated guanine dimers is tentatively observed. The fragmentation is not a consequence of the initial K-shell vacancy but purely due to multiple detachment of valence electrons, as a very similar positive ion fragmentation pattern is observed in femtosecond laser-induced dissociation experiments.
我们研究了双去质子化气相寡核苷酸[dTGGGGT - 2H]中的软X射线光吸收。发现X射线诱导的内壳层空位的主要衰变机制是俄歇衰变,至少有三个电子脱离,导致阴离子前体的电荷反转并形成带正电的光碎片离子。在与[dTGGGGT - 2H]的重离子(12 MeV C)碰撞中也观察到相同的过程,其中也会产生内壳层空位,但概率较小。DNA中单个K空位的俄歇衰变,随后是三个或更多低能电子而不是单个高能电子的脱离,对DNA损伤和损伤建模具有深远影响。产生三个平均自由程短的低动能电子而不是一个平均自由程长的高动能电子意味着电子诱导的DNA损伤将更局限于初始K壳层空位周围。由三电子脱离俄歇衰变引发的碎片化通道主要与质子化鸟嘌呤碱基损失有关,甚至初步观察到质子化鸟嘌呤二聚体的损失。这种碎片化不是初始K壳层空位的结果,而是纯粹由于价电子的多次脱离,因为在飞秒激光诱导解离实验中观察到非常相似的正离子碎片化模式。