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马来裔和原住民族线粒体基因组的洞察:异质性和与疾病相关的变异。

Insight of the mitochondrial genomes of the Orang Asli and Malays: The heterogeneity and the disease-associated variants.

机构信息

Integrative Pharmacogenomics Institute, Universiti Teknologi MARA Cawangan Selangor, Puncak Alam Campus, 42300 Puncak Alam, Selangor, Malaysia.

Integrative Pharmacogenomics Institute, Universiti Teknologi MARA Cawangan Selangor, Puncak Alam Campus, 42300 Puncak Alam, Selangor, Malaysia; Faculty of Pharmacy, Universiti Teknologi MARA Cawangan Selangor, Puncak Alam Campus, 42300 Puncak Alam, Selangor, Malaysia.

出版信息

Mitochondrion. 2022 Jan;62:74-84. doi: 10.1016/j.mito.2021.10.010. Epub 2021 Nov 5.

Abstract

Orang Asli are the oldest inhabitants in Peninsular Malaysia that forms as a national minority while the Malays are the majority. The study aimed to screen the mitochondrial genomes of the Orang Asli and the Malays to discover the disease-associated variants. A total of 99 Orang Asli from six tribes (Bateq, Cheq Wong, Orang Kanaq, Kensiu, Lanoh, and Semai) were recruited. Mitochondrial genome sequencing was conducted using a next-generation sequencing platform. Furthermore, we retrieved mitochondrial DNA sequences from the Malays for comparison. The clinical significance, pathogenicity prediction and frequency of variants were determined using online tools. Variants associated with mitochondrial diseases were detected in the 2 populations. A high frequency of variants associated with mitochondrial diseases, breast cancer, prostate cancer, and cervical cancer were detected in the Orang Asli and modern Malays. As medicine evolves to adopt prediction and prevention of diseases, this study highlights the need for intervention to adopt genomics medicine to strategise better healthcare management as a way forward for Precision Health.

摘要

马来西亚半岛的原住民是最古老的居民,他们构成了少数民族,而马来人则是多数族裔。本研究旨在筛选原住民和马来人的线粒体基因组,以发现与疾病相关的变异。共招募了来自 6 个部落(Bateq、Cheq Wong、Orang Kanaq、Kensiu、Lanoh 和 Semai)的 99 名原住民。使用下一代测序平台对线粒体基因组进行测序。此外,我们还从马来人那里检索了线粒体 DNA 序列进行比较。使用在线工具确定变异的临床意义、致病性预测和频率。在这两个群体中都检测到了与线粒体疾病相关的变异。在原住民和现代马来人中,检测到与线粒体疾病、乳腺癌、前列腺癌和宫颈癌相关的高频率变异。随着医学的发展,采用疾病的预测和预防,本研究强调需要通过基因组医学进行干预,以更好地管理医疗保健,作为精准健康的前进方向。

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