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移植肾再灌注后血浆中的循环 RNA 谱分析。

Circulating RNA Profiling in Postreperfusion Plasma From Kidney Transplant Recipients.

机构信息

Department of Animal Biotechnology, Kyungpook National University, Sangju, Gyeongsangbuk-do, Republic of Korea.

School of Medicine, Sungkyunkwan University, Gangnam-gu, Seoul, Republic of Korea.

出版信息

Transplant Proc. 2021 Dec;53(10):2853-2865. doi: 10.1016/j.transproceed.2021.09.044. Epub 2021 Nov 9.

Abstract

BACKGROUND

Ischemia/reperfusion injury (IRI) is inevitable in kidney transplantation (KT) and may lead to impaired tubular epithelial cell function and reduce graft function and survival. Renal IRI is a complex cellular and molecular event; therefore, investigating the genetic or molecular pathways associated with the early phase of KT would improve our understanding of IRI in KT. MicroRNAs (miRNAs) play a critical role in various pathologic events associated with IRI.

METHODS

We compared the expression profile of miRNAs extracted from 2 blood plasma samples, 1 from periphery and the other form gonadal veins immediately after reperfusion, in a total 5 cases of KT.

RESULTS

We observed that the total RNA yield was higher in postreperfusion plasma and that a subset of miRNAs was upregulated (miR-let-7a-3p, miR-143-3p, and miR-214-3p) or downregulated (let-7d-3p, let-7d-3p, miR-1246, miR-1260b, miR-1290, and miR-130b-3p) in postreperfusion plasma. Gene ontology analyses revealed that these subsets target different biological functions. Twenty-four predicted genes were commonly targeted by the upregulated miRNAs, and gene ontology enrichment and pathway analyses revealed that these were associated with various cellular activities such as signal transduction or with components such as exosomes and membranous organelles.

CONCLUSION

We present 2 subsets of miRNAs that were differentially upregulated or downregulated in postreperfusion plasma. Our findings may enhance our understanding of miRNA-mediated early molecular events related to IRI in KT.

摘要

背景

缺血/再灌注损伤(IRI)在肾移植(KT)中是不可避免的,可能导致肾小管上皮细胞功能受损,降低移植物功能和存活率。肾 IRI 是一个复杂的细胞和分子事件;因此,研究与 KT 早期相关的遗传或分子途径将有助于我们理解 KT 中的 IRI。MicroRNAs(miRNAs)在与 IRI 相关的各种病理事件中发挥着关键作用。

方法

我们比较了从 2 个血浆样本中提取的 miRNAs 的表达谱,1 个来自外周,另 1 个来自再灌注后立即的性腺静脉,总共 5 例 KT。

结果

我们观察到再灌注后血浆中的总 RNA 产量更高,并且一组 miRNAs 上调(miR-let-7a-3p、miR-143-3p 和 miR-214-3p)或下调(let-7d-3p、let-7d-3p、miR-1246、miR-1260b、miR-1290 和 miR-130b-3p)。基因本体分析表明,这些亚组靶向不同的生物学功能。上调 miRNAs 共同靶向的 24 个预测基因,基因本体富集和途径分析表明,这些基因与各种细胞活动(如信号转导)或与外泌体和膜细胞器等成分相关。

结论

我们提出了 2 个亚组的 miRNAs,它们在再灌注后血浆中上调或下调。我们的发现可能有助于我们理解与 KT 中 IRI 相关的 miRNA 介导的早期分子事件。

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