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烧伤早期转录组学反应:严重烧伤与免疫途径关闭有关。

Early Transcriptomic Response to Burn Injury: Severe Burns Are Associated With Immune Pathway Shutdown.

机构信息

Department of Surgery, MedStar Georgetown University Hospital, Washington, District of Columbia, USA.

Firefighters' Burn and Surgical Research Laboratory, MedStar Health Research Institute, Washington, District of Columbia, USA.

出版信息

J Burn Care Res. 2022 Mar 23;43(2):306-314. doi: 10.1093/jbcr/irab217.

Abstract

Burn injury induces a systemic hyperinflammatory response with detrimental side effects. Studies have described the biochemical changes induced by severe burns, but the transcriptome response is not well characterized. The goal of this work is to characterize the blood transcriptome after burn injury. Burn patients presenting to a regional center between 2012 and 2017 were prospectively enrolled. Blood was collected on admission and at predetermined time points (hours 2, 4, 8, 12, and 24). RNA was isolated and transcript levels were measured with a gene expression microarray. To identify differentially regulated genes (false-discovery rate ≤0.1) by burn injury severity, patients were grouped by TBSA above or below 20% and statistically enriched pathways were identified. Sixty-eight patients were analyzed, most patients were male with a median age of 41 (interquartile range, 30.5-58.5) years, and TBSA of 20% (11%-34%). Thirty-five patients had % TBSA injury ≥20%, and this group experienced greater mortality (26% vs 3%, P = .008). Comparative analysis of genes from patients with </≥20% TBSA revealed 1505, 613, 380, 63, 1357, and 954 differentially expressed genes at hours 0, 2, 4, 8, 12, and 24, respectively. Pathway analysis revealed an initial up-regulation in several immune/inflammatory pathways within the ≥20% TBSA groups followed by shutdown. Severe burn injury is associated with an early proinflammatory immune response followed by shutdown of these pathways. Examination of the immunoinflammatory response to burn injury through differential gene regulation and associated immune pathways by injury severity may identify mechanistic targets for future intervention.

摘要

烧伤会引起全身性的过度炎症反应,产生有害的副作用。已有研究描述了严重烧伤所诱导的生化变化,但转录组的反应尚未得到很好的描述。本研究的目的是描述烧伤后血液的转录组变化。2012 年至 2017 年间,前瞻性地招募了在一个区域中心就诊的烧伤患者。在入院时和预定的时间点(伤后 2、4、8、12 和 24 小时)采集血液。提取 RNA,并用基因表达微阵列测量转录水平。为了确定烧伤严重程度差异调节的基因(错误发现率≤0.1),根据 TBSA 将患者分为>20%和≤20%两组,并确定统计学上富集的途径。共分析了 68 例患者,大多数患者为男性,中位年龄为 41 岁(四分位间距 30.5-58.5),TBSA 为 20%(11%-34%)。35 例患者的%TBSA 损伤≥20%,该组死亡率更高(26% vs 3%,P=0.008)。比较 TBSA≥20%和<20%的患者的基因发现,伤后 0、2、4、8、12 和 24 小时分别有 1505、613、380、63、1357 和 954 个差异表达基因。通路分析显示,TBSA≥20%组的几个免疫/炎症通路在最初出现上调,随后下调。严重烧伤与早期促炎免疫反应有关,随后这些通路被关闭。通过严重程度分析烧伤后免疫炎症反应的差异基因调控和相关免疫途径,可能确定未来干预的机制靶点。

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